Micromonas commoda: MICPUN_78358
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Entry
MICPUN_78358 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
mis
Micromonas commoda
Pathway
mis03020
RNA polymerase
mis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MICPUN_78358
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_78358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_78358
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_78358
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_78358
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
MICPUN_78358
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_78358
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MICPUN_78358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
PA14
Motif
Other DBs
NCBI-GeneID:
8240902
NCBI-ProteinID:
XP_002500191
JGI:
MicpuN3_78358
UniProt:
C1DYL5
LinkDB
All DBs
Position
2:complement(join(1313610..1314068,1314234..1314332))
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AA seq
185 aa
AA seq
DB search
MFWHIKLERNIVLEPRFFGRNMRDTLMQRLKHEVEGSCTGKHGYIVMVTDFTNISEGMVT
DDGTARAKFRVEFDAIAFRPFKGQVLDAVVTEVNKFGFFAEAGPMNLFVSNQLISDDMKF
ESIDNANRYVSSDKSVSVQKNGEVRVRVVGMRIDAQEIFCVATMKEDYLGAIDQDAGADK
VADEY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgttttggcacatcaagctggagaggaacatcgtcctggagcctagattcttcgggcgg
aacatgagggatacgctcatgcagaggctgaagcatgaggtcgagggcagctgcacgggt
aagcacgggtacatcgtgatggtcacggacttcaccaacatcagcgagggcatggtcacc
gacgacggcacggcgcgggccaagttccgcgtggagtttgacgccatcgcgttccggcct
ttcaagggacaggtgctcgacgcggtggtgacggaggtgaacaagttcgggttcttcgcc
gaggccggcccgatgaatctcttcgtgtccaaccagctcatatcggacgacatgaagttc
gagagcatcgacaacgcgaaccgttacgtgagctcggataaatcggtgagcgtgcagaaa
aacggcgaggttcgggtgcgagtggtggggatgaggatcgacgcgcaggagatcttctgc
gtggcgaccatgaaggaggactacctcggggccatcgaccaggacgcgggtgccgacaag
gtggccgacgagtactaa
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