Micromonas commoda: MICPUN_78752
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Entry
MICPUN_78752 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_78752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_78752
Spliceosome [BR:
mis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
MICPUN_78752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
8240706
NCBI-ProteinID:
XP_002499998
JGI:
MicpuN3_78752
UniProt:
C1E079
LinkDB
All DBs
Position
2:complement(560193..561644)
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AA seq
483 aa
AA seq
DB search
MDAARLAAERRERAARSSRECPYLDTVNRSLLDFDFEKCCSVSLVPHNVYACLVCGKYFQ
GRGPSTHAYVHALEATHHVFMNLDTGRVYCLPDMYEVVDASLDDIRHVLNPKFTSPQIAE
VDHRRLWSRGLDGTDYLTGAVGLNNLRATDYVNVVLQSLMRVGPVRDFFLAQRELGVSGA
GGGGAGGAGPGPAASPLARRFGELTRKIWNSRNFKGQVSPHEFMQAVLAASDRRFLIDKQ
SDPVEFLSWLLNTLNADLSGKKRGGKSIVSRCFQGELEVTNAGLAYQDDPPVRMPFFMLS
LDLPAAPLFQDAMEKNTIPQVPLFQILRKFDGETEHEVLRPEPRRKRYKLARLPRYLIVH
HKRFTKNNFFVEKNPTIVTFPVKNLQLSDHVPVPKLPDGRDVPCKYNLVANITHEGKPES
GAYRAAVWHKADGNWYDTEDLTVNEVLPQQVVLTETYLQIYELDKDAAPGPPPAPKEDVD
MFA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcgcgcctcgccgccgaacgcagggagcgggcggctaggtcgagccgcgag
tgcccgtacttggacaccgtgaaccgctcgctgctcgactttgactttgagaagtgctgc
agcgtctcgctcgtcccgcacaacgtgtacgcgtgcctggtgtgcggcaagtactttcag
ggccgcgggccgtccacgcacgcgtacgttcacgcgctggaggcgacgcatcacgtgttc
atgaacctggacaccgggagggtgtactgcctgccggacatgtacgaggtggtggacgcg
tcgttggacgacatcagacacgtgctcaaccccaagttcacgtccccgcagatcgcggag
gttgaccaccggaggctgtggtccaggggcctggacgggacggattacctgacgggcgcg
gtgggtttgaacaacctgcgagcgacggactacgtgaacgtcgtgctgcagtcgctgatg
cgcgtcgggccggtccgggatttcttcctggcgcagagagagctcggtgtttcgggcgcg
ggcgggggaggcgcgggcggggcggggccgggtcccgcggcgtcgccgctcgcgaggagg
ttcggcgagctgacgcgaaagatttggaactctcgaaactttaagggtcaggtttcgccg
cacgagttcatgcaggcggtgctcgcggcgtccgaccggcggttcctgatcgataagcag
tccgacccggttgagttcctgtcttggcttctcaacacgctcaacgccgatctcagcggt
aagaaacgcggggggaagagcatcgtgagccggtgcttccagggtgagttggaggtgacc
aacgcgggactggcgtaccaggacgacccgccggttcgcatgccgttcttcatgctgtcg
ctggacctacccgcggcgccgctcttccaggacgcgatggagaagaacaccatcccgcag
gttccgctctttcagattttgcgaaagtttgacggcgagacggagcacgaggttctccgg
ccggaacccaggcgtaagcggtacaaactcgcgcgactgccccggtacctcatcgttcac
cacaagaggttcacgaagaacaactttttcgtggagaagaaccccacgatcgtcacgttc
ccggtcaagaacttgcagctgtcggaccacgtaccggtgccgaagcttccggatggccga
gacgtcccttgcaagtacaacctggtggcaaacataacgcacgagggtaagcccgagagc
ggcgcgtaccgcgcggcggtgtggcacaaggctgacgggaactggtacgacaccgaggac
ctgaccgtgaacgaggtgttgccccagcaggtggtcctgacggagacctacttacagata
tacgagctggacaaggacgccgcgcccggtccgccgccggcgcccaaggaggacgtggac
atgttcgcctga
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