Micromonas commoda: MICPUN_79030
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Entry
MICPUN_79030 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mis
Micromonas commoda
Pathway
mis03440
Homologous recombination
mis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MICPUN_79030
03460 Fanconi anemia pathway
MICPUN_79030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_79030
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_79030
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MICPUN_79030
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Topoisomerases
MICPUN_79030
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
MICPUN_79030
FA (Fanconi anemia) pathway
MICPUN_79030
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-GeneID:
8241059
NCBI-ProteinID:
XP_002499865
JGI:
MicpuN3_79030
UniProt:
C1DZI4
LinkDB
All DBs
Position
2:complement(<84897..86813)
Genome browser
AA seq
639 aa
AA seq
DB search
MPPIRVLNVAEKPSVAKEVSRVLSNGGCTNRRGASQYNAIWEFPYTVMGQRCDMVFTSVT
GHVMGLDFPPSHRGWNTCNPRELIDGARVVKQVDKGKEKVAENLRKEASRCAWLILWLDC
DREGENIAFEVMDICKQSKPGIRCLRARFSALSHNDVTRALARLVDPNPHESAAVDMRQE
LDLRFGSAFTRFNTLLLQRSGVAARLPGADADGKGNIVSYGPCQFPTLGFIVQRKWDIDA
HVPENFWKIKLSHAVGQGREASIAEFEWSRDRLFDEHLATALFAAVRGAGQAVVTREGGT
ESKKWPPHPLNTLEMQKRLNRAIRVSPEQIMKLAEELYQAGFISYPRTETDKFPHDFDYR
TSIEQLHPHPKFGFHAINLSGGRFRQPPGGGHDDKAHPPIYPTKLASTQDYASWRNRNSR
LIDVYEFVCRHFLASCSLPAVAHKTTVEIDMGGERFKATGNMIKELNYLEVYGKGPAGGP
VLQPSYDGWSSNTIPSYVVGQRFQPTELSLRPGRTQPPPLLSETDLLSKMEAHQIGTDAT
QAQHIEKVVGERGYARKVGDNRLMPTELGEALCEGYARMGLAGMWLPHLRAETEADTGRV
ARGEMNATVALRNAIGPAIDAYRGLEANKQRLVDAVTEF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgatacgcgtcctcaacgtcgcggagaagccctccgtggcgaaggaggtctcc
cgcgtcctgtccaacggcggatgcaccaaccggcggggcgcgtcgcagtacaacgcgatc
tgggagttcccctacaccgtcatgggccagcggtgcgacatggtgttcacgtccgtcacc
gggcacgtcatgggcctggatttcccgccgtcgcaccgcgggtggaacacgtgcaacccg
cgggagctcatcgacggcgccagggtcgtgaagcaggttgacaaaggcaaggagaaggtg
gcggagaacctccgaaaggaggcgagccgatgcgcgtggctcatcctctggctcgactgc
gacagggagggcgagaacatcgcgttcgaggtgatggacatctgcaaacaatccaaaccc
ggcattcgatgcctgcgcgcccggttcagcgcgctctcgcacaacgacgtgacccgcgcc
ctcgccaggctcgtggacccgaacccgcacgagagcgccgcggtggacatgaggcaggaa
ctggacctccgattcggatctgcgtttacccgattcaacacgctgctcttgcagcggtcg
ggggtggccgccaggctgccgggcgcggatgcggacggcaagggtaacatcgtcagctac
ggcccgtgccagttccccaccctcggcttcatcgtccagcgcaagtgggacattgacgcg
cacgtcccggaaaacttttggaagattaagctgagccacgcggtgggccaaggacgcgag
gcgtccatcgcggagttcgagtggtccagggacaggctattcgatgaacacctggccacc
gcgcttttcgcggcggtgcgcggcgcgggccaggcggtcgtgacccgggaagggggaacc
gagagcaagaagtggccgccgcatccgctcaacacgctcgagatgcagaagcgccttaac
cgcgccatacgcgtatcccccgagcagatcatgaagctggcggaggagctgtaccaggcg
ggcttcatctcctacccgaggaccgagacggacaagttcccacacgacttcgactacagg
acatccatcgagcagctccacccgcatcccaagtttggctttcacgcgataaacctctcg
ggcgggcgctttcgacaacccccgggcggaggccacgacgacaaggcgcaccccccgatc
tacccgaccaagctcgcgtcgacgcaggattacgcgagctggagaaaccgaaactcgcgt
ttgatcgacgtgtacgaattcgtgtgccgacactttctcgcgtcgtgttcgctcccagcc
gtcgcgcacaagaccacggtggagatcgacatgggcggcgagaggttcaaagccacgggg
aacatgatcaaggagctcaactacctcgaggtgtacggtaaaggaccggcgggtgggccg
gtgttgcagccatcgtacgacgggtggtccagtaacaccataccgtcgtacgtcgtcggg
cagcggttccaaccgacggagctgtcgcttcgaccgggtcgcacgcagccgccgccgctg
ctctccgagacggacctgctctcgaagatggaggcgcaccagatcggcacggacgcgacg
caggcgcaacacatagagaaggtggtgggcgagcgcgggtacgcgcgcaaggttggagat
aatcggttgatgcccacggagctcggcgaggcgctctgcgaggggtacgctcggatggga
ctggccggcatgtggctcccgcacctgcgggcggagacggaggctgacacgggacgggtg
gcgaggggtgagatgaacgcgacggtggcgctgaggaacgccatcggacccgccatcgac
gcgtacaggggattggaggcgaacaaacagaggctcgtcgacgcagtgacggaattt
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