Micromonas commoda: MICPUN_80773
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Entry
MICPUN_80773 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_80773
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_80773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_80773
03041 Spliceosome [BR:
mis03041
]
MICPUN_80773
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_80773
mRNA degradation factors
5'-3' decay
Lsm complex
MICPUN_80773
Spliceosome [BR:
mis03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MICPUN_80773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
8242737
NCBI-ProteinID:
XP_002501844
JGI:
MicpuN3_80773
UniProt:
C1E4E5
LinkDB
All DBs
Position
4:complement(1093755..1094126)
Genome browser
AA seq
123 aa
AA seq
DB search
MLPLSLLKTSQGHPMLVELKNGETYNGHLVSCDTWMNVHLREVICTSKDGDRFWRMANCY
VRGNTIKYICVPDEVIGLVQEENLKKSQMKPQVGGRGRGGRDGGRGRGDGGRGGRGGRGG
RGV
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctgctgaagacctcgcagggccaccccatgctggtggagctcaag
aacggcgagacgtacaacggccacctggtgagctgcgacacgtggatgaacgtgcacctc
cgggaggtgatctgcacgtcgaaggacggcgacaggttctggcggatggccaactgctac
gtgcggggcaacacgatcaagtacatctgcgtgcccgacgaggtcatcgggctggtgcag
gaggagaacctcaagaagtcccagatgaagccccaggtcgggggacgggggcgcggaggc
agggacggcggcaggggccggggcgacggcggcaggggaggccggggcggcaggggcggc
cgcggcgtgtga
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