KEGG   Micromonas commoda: MICPUN_81470
Entry
MICPUN_81470      CDS       T02695                                 
Name
(RefSeq) wd-40 repeat family protein/notchless protein
  KO
K14855  ribosome assembly protein 4
Organism
mis  Micromonas commoda
Brite
KEGG Orthology (KO) [BR:mis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mis03009]
    MICPUN_81470
Ribosome biogenesis [BR:mis03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    MICPUN_81470
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th DSE1_N ANAPC4_WD40 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd ASA1 Beta-prop_WDR41 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_1st CFAP251_N Beta-prop_RIG_2nd NLE Beta-prop_DCAF12 PAC11 Beta-prop_EIPR1 eIF2A Beta-prop_SPT8 WD40_RFWD3 Tricorn_N Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_Vps41 Beta-prop_HPS5 RMC1_N Beta-prop_NOL10_N Cytochrom_D1 WDR54 PD40 FAD_binding_9
Other DBs
NCBI-GeneID: 8243316
NCBI-ProteinID: XP_002502029
JGI: MicpuN3_81470
UniProt: C1E5N7
LinkDB
Position
5:247093..248580
AA seq 495 aa
MATLYVPDSKRRKKDREELALNAPSGPENRVNIIAQLEDAEGNPAGPQLDLPHDADPKQL
EEVLNALLQNEDKVPFAFYAADAEITGTLGEHLRKRDASVETVLKIVYQPQALFRVRPVT
RCSSAIPGHAEAVLSVAFSPDGKHLASGSGDTTVRLWNHETETPRHTCSGHANWVLCIAW
SPDGKYVASGGMDKDVRLWDPESGSAVGGPMRGHKKHVTALAWEPAHVRYPPVRLASASG
DGTVRVWNVVHKNCELALTAHTNSVTAVKWGGEGLIYSASRDTTVMVWNAETGAVVRQLR
GHGHWVNTLALSSEYVVRTGPYDHKATKPKDDVEAKAKALERYKAATGGKGERIISGSDD
FTMFMWTPGTSKQPLQRMTGHVQLINHVLFSPDGRWVASASFDKAVKLWDGHNGTFVATM
RGHVGPVYQIAWSADSRMVVSGSKDSTLKVWSVRTKKLELDLPGHADEVFAVDWSPMGTK
AASGGKDKMLRLWRH
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggcgaccttatacgtccccgatagcaagcgtcgcaagaaggaccgcgaggagttggcg
ctcaacgccccgtccggccccgagaaccgcgtcaacatcatcgcgcagctcgaagatgcc
gagggcaaccccgcgggcccgcagctggacctgccccacgacgcggacccaaagcagctc
gaggaggtgctcaacgcgctcctgcagaacgaggacaaggtcccgttcgcgttctacgcg
gcggacgcggagatcaccggcaccctgggcgagcacctgcggaagcgcgacgcgagcgtg
gagaccgtcctgaagatcgtctaccaaccccaggcgctcttccgagttcgccccgtcacg
cgctgctcctccgccattcccggccacgccgaggcggtcctctccgtcgcattctcccca
gacggcaaacacctcgcgtccggaagcggtgacaccaccgtgcgcttgtggaatcacgag
acggagaccccgcggcacacctgctccggccacgccaactgggtcctctgcatcgcgtgg
tccccagacggcaaatacgtcgcgagcggcggcatggacaaggacgtgcggctgtgggac
ccggagagtgggtccgcagtaggcgggcccatgcggggccacaagaagcacgtcaccgcg
ttggcttgggaaccggctcacgtgcgataccccccggttcggctcgcgtcggcctcgggc
gacggaaccgttcgcgtgtggaacgtcgtgcacaaaaactgcgagctggcgctcaccgcg
cacaccaactcggtgaccgccgtgaagtgggggggcgaggggctcatctacagcgcgtcg
cgggacacgacggtgatggtgtggaacgcggagacgggcgcggtggtgcgtcagctgagg
ggccacgggcactgggtgaacaccttggcgctctcgtcggagtacgtcgttcgaaccggg
ccgtacgatcacaaggcgacaaagcccaaggacgatgtcgaggccaaggccaaggcgctg
gagcggtacaaggcggcgactgggggcaagggggagcggatcatcagcgggtcggacgac
ttcaccatgttcatgtggaccccggggacttcgaagcagccgctgcagcgaatgacgggg
cacgttcagctcataaaccacgtcctgttctccccggacgggcggtgggtggcgtccgcg
agtttcgacaaggctgtgaagctctgggacggacacaacggcacgttcgtcgccaccatg
cgggggcacgtcggaccggtgtatcagattgcctggtcggcggattcccggatggtggtc
agcggcagcaaggactccacgctgaaggtgtggtccgttcgaaccaagaagctggagttg
gacctgccggggcacgcggacgaggtgttcgcggtggactggtcgcccatggggacaaag
gcggcgagcgggggaaaggacaagatgcttcggctctggcgtcactag

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