Micromonas commoda: MICPUN_82167
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Entry
MICPUN_82167 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14856
protein SDA1
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_82167
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
MICPUN_82167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Cnd1
Death_3
Motif
Other DBs
NCBI-GeneID:
8243939
NCBI-ProteinID:
XP_002502278
JGI:
MicpuN3_82167
UniProt:
C1E732
LinkDB
All DBs
Position
5:join(1214855..1215616,1216046..1216649,1216998..1217223,1217605..1217839,1217879..1218139)
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AA seq
695 aa
AA seq
DB search
MSRCDLLSLQGKAKRDPEGYRDDVLMQLQHYNALHGLFMLKPGKDFREFADLVGFLAQVS
ASYKADIPSFHVGLIELLEKHYALLDPHLRRSLVSALILLRNRGSATAAELLPLFFKLFR
CQDKQLRVMIFRHIVADVKGANKTRRNEALNRQVQNFLAAALKDENEAAAKKALAVITEL
YRRNVWSDARTVNLVADACRHPSPKILVAALKFFLGQDEAAEAAAEAGDDSDDDDDDAPK
PKTGVGTAAGTSSGAKKQAKLKRQMASIRKAGRREEGNNGEARFAAMQLVNDPQAFAEHL
FGRLQSGSALKFDTKMLLIQVVSRVVGLHRLHLLHLYPFLQRYVQPNQREVTRLLASAAT
ACHELVPPDALEPLLRQLVNQFVHDRARPEVVAVGINTVREICVRCPLVMHSDLLQDLAQ
YKRARDKPVATAARALIALFRELAPGMLEKKDRGKGADLERTVAAFGDFKAEDRVAGAEL
LQKEAARLRREEREAAKAAAEAVSDGEDDGEEGGEDEDEDEDEDGEDGDEAEAEEAETNA
AHSDSEEDLVEHTRVLEPEDFRRIKALREAGKLDAAMEKVGAKKAKETAAEEMRRMLRLA
DRSNVADRRAHDKETRVASVMAGREDRGEFGASQARKNKKSGGTSNVEKKKRKNMPLAAR
VQAAGRRRRGSAKFGAAKAVKDKQFKGKFRKGANN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtgcgacctcctctcgctgcaggggaaggctaagcgcgacccggaggggtat
cgcgacgatgtgctgatgcagctccagcactacaacgccctccacgggctgttcatgctg
aagcccggcaaggactttcgcgagtttgccgacctcgtcggcttcctcgcgcaagtgtcc
gcgtcctacaaggcggacataccatcctttcacgtcggcctcatcgagctcctcgagaag
cactacgccctgctcgacccgcacctgcgccgctccctggtatccgcgctcatcctcctg
cggaacaggggcagcgccaccgccgcggagctcctgcccctcttcttcaagctcttccga
tgccaggacaagcagcttcgcgtgatgatctttcggcacatcgtagccgacgtcaagggc
gcgaacaagacccggcgcaacgaggcgctcaacaggcaggtgcaaaacttcctggccgcc
gcgttgaaggacgagaacgaggccgccgccaagaaggcgctcgcggtcatcacggaactc
tacaggagaaacgtctggtcggatgcgagaacggtgaacctcgtcgcagacgcgtgtcga
catccgagcccgaagatcctcgtggccgccttgaagttcttcctcgggcaggacgaggcc
gcggaggctgccgcggaggcgggggacgacagcgacgacgacgatgacgacgcgccgaag
cccaagacgggcgtcggaaccgccgcgggtacgagcagcggggcaaagaagcaggccaag
ctcaagcgccagatggcgtccatacgcaaagccggacggcgcgaggagggcaacaacggt
gaagctcgattcgccgcgatgcaactggtgaacgatccgcaggctttcgccgagcacctc
ttcggccgcctgcagagcggcagcgcgctaaagtttgacacgaagatgctgctgatccag
gttgtgtcgcgcgtggtgggtctgcaccggctgcacctgctgcacctgtacccgtttctg
cagaggtacgtccagccgaaccagcgcgaggtgacgcggctgctggcgtccgccgccacc
gcgtgtcacgaactcgtcccccccgacgccctcgagcccctgctccggcagctcgtgaac
cagttcgtccacgacagggcgaggcccgaggttgtcgccgtgggtatcaacaccgtgagg
gagatttgcgtgcggtgcccgctggtgatgcacagcgacttgctgcaggatctggcgcag
tataagcgagccagggacaagccggtggccaccgcggcgagggcgctcatcgcgctcttc
cgcgaactcgcgccgggcatgctcgagaagaaggatcgcggaaaaggagccgatttggaa
aggaccgtcgccgcgttcggagacttcaaggcggaggatcgagtcgcgggcgccgagctc
ctgcagaaggaggcggcgaggctccgacgagaggagcgagaggcggccaaggctgcggcg
gaggcggtgagcgacggggaagatgatggggaggagggtggggaggatgaggatgaggat
gaggatgaggatggggaggatggggatgaggcagaggcggaggaggcggagacgaacgcg
gcgcactcggactcggaggaggacctcgtggagcacacgcgggtgctcgaacccgaggat
tttcggcggatcaaggcgcttcgcgaggcgggcaagctggacgcggctatggagaaggtc
ggggcgaagaaagcgaaggagactgcggcggaggagatgcggcggatgcttcggctcgcg
gaccgttcgaacgtcgcggatcgcagggcgcacgacaaggagacgagggtggcgtccgtg
atggcggggcgcgaagaccgcggggagtttggcgccagtcaggcgaggaagaacaaaaag
tcggggggcaccagcaacgtcgagaagaagaagaggaagaacatgccgctcgcggcgagg
gtgcaggcggcggggcgacggcggcggggtagcgccaagttcggcgcggcgaaggctgtc
aaggacaagcagttcaaggggaaattcaggaagggcgcgaacaactga
DBGET
integrated database retrieval system
