Micromonas commoda: MICPUN_82380
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Entry
MICPUN_82380 CDS
T02695
Name
(RefSeq) predicted protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_82380
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
MICPUN_82380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Motif
Other DBs
NCBI-GeneID:
8244487
NCBI-ProteinID:
XP_002502837
JGI:
MicpuN3_82380
UniProt:
C1E861
LinkDB
All DBs
Position
6:join(<501944..502060,502115..503122,503765..504550)
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AA seq
636 aa
AA seq
DB search
CCTQCGKILDDNVFSTDPTFSKTAGGATQVDGNFVPESGVDSHEKTINKGKYEISQVADR
LGIRPREDIANAAHRLYKLAVQRNFTRGRRTQQVAAACLYIICRQESRPYMLIDFSDVVQ
TNVYVLGAVFLQLCRLLRLEQHPLISKPIDPSLFIHRFADRLTLGRKMHAVANTALRLVA
SMKRDWMQTGRRPSGVCGAALWVAALLHGYERSKRDVVAVVHVGEATLRKRVTEFENTPS
AMLSVEEFDIRAKDYEKEQAALAESGALLGAPGGITALTCIHKDHDGSTHFAHGMCRQCY
LEYARVSGGARGGEDPPAFQAAEARRDREAQRALPAPQATLALPAPAAKKGKKMSAKEAR
EAMEAIEREARAKAKVKGEDEDEDTDAEPETFSDVDDEEIDNYIHTAEEVKLRRVIWSEL
NRDYLETQAAKEAAVAAAPPALPGIEGDGGKGGKKRKKYTHQVPADTAAEAAQQMLSSKK
ISSKINYDALNDLFKQDESNERAKKTKGGDQSEGGGAGSASAATAAAAPAVGHGKGRLSR
LGGGERGLGALGGGKGLGGGGLGSRLAAGATLVAGGDAAGAAETANPAVGSKFDSIAAAV
DIRPKQTARKSRGLSAATLAMAGKRKGGKRDADATK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
tgctgcacccagtgcggtaagatcctcgacgacaacgtcttcagcaccgaccccacgttc
agcaagaccgcgggcggcgccacccaggtcgacggcaacttcgtcccggagagcggcgtg
gactcgcacgagaagaccattaacaagggaaagtacgagatctcgcaggttgccgatcga
ctcggcatcaggccacgtgaggacatcgccaacgcggcgcaccgtctgtacaagctcgcg
gtgcagcgcaacttcacccgagggcgaaggacgcagcaggtggcggcggcgtgcctctac
atcatctgccggcaggagtccaggccgtacatgctcatcgacttctccgacgtggtgcag
accaacgtgtacgtgctaggggcggtcttcttgcagctgtgccggctgctgcggctggag
caacacccgctgatcagcaaacccatcgacccgagcctcttcatccacaggttcgccgat
cggctcacgctcgggcgcaagatgcacgcggtggccaacaccgcgttgcgcctggtggcg
tccatgaagcgggactggatgcagacgggacgcagaccctcgggcgtgtgcggcgccgcg
ctgtgggtcgccgcgttgcttcacgggtacgaacggagcaaacgagacgtcgtagccgtc
gtgcacgtcggcgaggcgacgctgcgaaagcgggtgacggagtttgagaataccccgtcc
gcgatgttatccgtcgaggaattcgacataagggcgaaagactacgaaaaggagcaggcg
gcgctcgcggagagcggcgctctcctgggagcgcccggcggtatcaccgcgctaacctgc
atccacaaggatcacgacgggtccacgcatttcgcgcacgggatgtgccggcagtgctac
ctcgagtacgcgagggtgagcggcggcgccaggggcggggaggacccgcccgcgttccag
gcggcggaggcgcgccgcgacagggaggcgcagcgggcgctacccgcgccgcaggcgacg
ctcgcgctgccggctcccgccgccaaaaaggggaagaagatgtccgcgaaggaagccagg
gaggccatggaggcgatcgaacgcgaggcgagggcgaaggccaaggtcaagggtgaggac
gaggacgaggacaccgacgccgagccggaaactttctcagacgtggacgacgaggagatt
gacaactacatccacaccgcggaggaggttaaacttcgacgcgtcatctggtcggagctc
aacagagactatctggaaacacaggctgcgaaggaagcggccgttgcggcggcgccgccc
gcgctgccggggatcgagggcgacggcgggaagggtggcaagaagcgaaaaaagtacacg
caccaagtcccggcggacacagccgcagaggcggcgcagcagatgctctcgagcaagaag
atctcctcgaagatcaactacgacgcgctgaacgacctgttcaagcaggacgagtcgaac
gagcgcgcgaagaagacgaaggggggagaccaaagcgagggagggggcgcggggtcggcg
tcggcggcgaccgccgccgccgctcccgcggtcggccacggcaagggaaggctctcgagg
ctcgggggcggcgaacgcggtctgggtgcccttggcggcgggaagggcctgggtggcggc
gggctcgggtcccggctcgcggcgggcgcgacgctcgtggctggtggggacgccgcgggc
gccgccgagactgccaacccggctgtcggctcaaagtttgactcgattgcggcggcggtt
gacattcggccaaagcagacggcgaggaagagcaggggtctcagcgcggcgacgctggcg
atggcggggaagaggaaaggcgggaagagggacgccgacgcgacgaagtga
DBGET
integrated database retrieval system
