Micromonas commoda: MICPUN_82627
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Entry
MICPUN_82627 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14774
U3 small nucleolar RNA-associated protein 25
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_82627
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MICPUN_82627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP25_NTPase-like
Utp25_C
Motif
Other DBs
NCBI-GeneID:
8244397
NCBI-ProteinID:
XP_002503110
JGI:
MicpuN3_82627
UniProt:
C1E7P4
LinkDB
All DBs
Position
6:complement(join(163480..164568,164620..164802,164977..165636))
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AA seq
643 aa
AA seq
DB search
MHLRRTVTQDAADAVALTAPKFKPVTGGGDSPGGDSPGAGRWEADKTALEDARDAVAPVI
NAPPPRAPVGLPAKLKERWNALYDPASIAALNKRFKREKNPKGGKGESKVPAKDAKDEEA
KARRARAIAALPTAPFKSRLQRELFALMDGYRDVVYTARKPPGSARKEPLGPDGSGGGGD
DVMDAYLLHVVNHVMRTRTRITKNNESLLKRSKAKEIEMDDDLPRDQGFVRPTVLILVPM
RNVAGRVVRRLLQMCPAAQGRADAVNKLDRFAEDFGDGDSDRRRGGGQWIPEDHKRLFRG
NTDDHFRLGIKVTKASVRLYVDFFGSDVLVCSPLGLVTKLQESGKSAADFLASIELLVVD
NADVLMMQNWQHVLTLFSSCNQLPKDQHGVDIMRVHETHLNGLARNLRQTIVLSSFPCAE
INALVRNECANLAGRVRWKESFPGVLGWAARAVRNAGGLRQQFERLPDAASIADSDDVRF
KHFTRRVLPRLRENPAPGALIFIRDYLDFVRVRNLLTAEDVSFAVTSEYTDQRDAARARS
IFADGRKRVLLVTERAHFYFRRRIRGVREVHFYSLPDHAGFYAEMLGFLGDGDGRSAAST
ANAPSATAVFSRLDALTLERVCGSARAKKMLAPDANSTFIFTA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgcacctccgaaggaccgtcacgcaggacgccgcggacgccgtcgcgctgacggcgccg
aagtttaaacccgtgacggggggcggtgactcgccgggcggtgactcaccgggagccgga
cgatgggaggctgacaagacggcgctggaggatgcacgggacgcggtcgcgccggtgatc
aacgcaccgcccccgcgcgcgcccgtcggcctccccgccaagctcaaagagcgctggaac
gcgttgtacgatcccgcgtcgatcgcggcgctgaacaagagatttaaacgagaaaaaaac
ccaaaggggggcaaaggagagagcaaggtacccgcgaaggacgcgaaggacgaggaggcc
aaggcgcgacgcgcgcgtgcgatcgcggcgctcccgacggcaccgttcaagtcgcgtctc
caacgcgagttgttcgcgctgatggacggttacagagacgtcgtgtacacggctcggaaa
cctccggggagtgcccggaaggaaccgttgggtccggacggctcgggcggcggcggcgac
gacgtcatggacgcgtacctcctccacgtcgtcaaccacgtgatgcgaacgcgcacgcga
atcaccaagaacaacgaatcgttgctgaagcggtccaaggctaaggagatcgagatggac
gatgacctaccccgggaccagggtttcgttcggccgacggtgctcatcttggtgccgatg
cgaaacgtagccgggagggtggtgagacggctgcttcagatgtgtcccgccgctcaggga
cgggcggacgcggtgaacaagctcgatcgattcgccgaggatttcggcgacggggattcc
gaccggcgacgcggcggcgggcagtggatccccgaagaccacaagcggctcttccgcggt
aacaccgacgaccacttcaggctcgggatcaaggtcaccaaggcgtccgtccgactgtac
gtcgactttttcggatccgacgtcctcgtctgctcgcccctcggcctggtgacgaagctc
caggaatccggcaagagtgccgccgactttctcgcgtcgatcgagctgctcgtcgtggac
aacgcggacgtcctcatgatgcaaaactggcagcacgtgctcacgctcttctcgtcgtgc
aaccagctgccgaaggaccagcacggcgtggacatcatgcgcgtgcacgaaacccacctc
aacggcctggcgagaaaccttcggcagacgatcgtgctctcgtcgtttccgtgcgccgag
atcaacgcgctggtcaggaacgagtgcgctaacctcgcggggcgggttcgttggaaggag
tcatttcccggggtgctcggctgggccgcgagggccgtgcgaaacgcgggagggctccgg
caacagttcgagaggcttccggacgccgcgtccatcgctgactcggacgacgtgcggttc
aaacacttcaccaggcgggtgctgccgcggttgcgagagaatccagcgccgggcgcgctc
attttcatccgcgattacctcgatttcgtgcgggtacgtaacctgctcaccgccgaggac
gtctccttcgcggtcacctccgagtacaccgaccaacgggacgccgccagggcgaggtcc
atcttcgcggacggtcgcaagcgcgtgctgctcgtcaccgaacgagcgcatttttacttt
cgccgaaggatcaggggagtgcgggaagttcacttctactccctgccggatcacgcgggt
ttctacgcggagatgctcgggtttttgggggacggggacggacggtcggcggcgtcgacg
gcgaacgcgccgagcgccacggcggtgtttagtaggttggacgcgttaacgctggagcgg
gtgtgcgggagcgcaagggcgaaaaagatgttggcgccggatgcaaactcgacgttcata
ttcaccgcgtga
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