Micromonas commoda: MICPUN_82674
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Entry
MICPUN_82674 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_82674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_82674
03012 Translation factors [BR:
mis03012
]
MICPUN_82674
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MICPUN_82674
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MICPUN_82674
Translation factors [BR:
mis03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
MICPUN_82674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HA2_C
HA2_N
AAA_19
ATPase
nSTAND3
AAA_16
T2SSE
AAA_22
Rad17
Motif
Other DBs
NCBI-GeneID:
8244118
NCBI-ProteinID:
XP_002502830
JGI:
MicpuN3_82674
UniProt:
C1E845
LinkDB
All DBs
Position
6:join(469464..470267,470547..>471533)
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AA seq
597 aa
AA seq
DB search
MRPHASVTPEQAAAGAAALARRIASDPALAEIQRKRAALPVDEFKGQILDAVARNQVVLV
AGATGCGKTTQVPQYLIDDAWGNGRGATIMCTQPRRISAVTVSERVANERGENIGAGSVG
YQIRLETKASADCALMFCTNGVLLRRLTSPGADKMLESLSHIVIDELHERDLFADFLTIV
LRGVLARHRHLRLVLMSATVREDLFSDYFGGCPVIRVPGYTHPVADYHLEDILSLVGYGG
GGGGGVHDFVYAATADPDSPEGQAVQAATLDAAEDEIRRLSAMENASAQMSQYQIQADPD
EVDLQLAQELIHWILTHRAGEMQTAHGGPAGAVLVFLPGWNEISQLRDNMAADPRFSDGT
TLVLPLHSMVPPQDQKRVFQRPPRGVRKVVLATNIAETAVTIDDVVFVVDSGRLKEKSYD
AHTGVSTLQAAWISRASAQQRRGRAGRVRPGECYRLYSTARMSSFADFQLPEMQRSPLEE
LCLQVRMLAEASSLGGERGGGAAAVGMGQGSTAEFLLQAVEPPIPQAISQAVALLQDIGA
MKDDEGLTRLGRHLGEMPVHPRVGKMLLYATLLGVLDPVLTVACASAYRSPFVVSVD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgcacgcgagcgtcaccccggagcaggcggccgccggcgccgcggctctcgcg
cggaggatcgcgtcggacccggctctggcggagattcagcgaaagagagcggcgctcccg
gtggacgagttcaagggtcagattttggatgcggtggcgcgtaaccaggttgtgctggtg
gcgggcgccacgggatgcggcaagacgacgcaggttccccagtacctcatagacgacgcg
tggggcaacgggaggggcgcgacgatcatgtgcacgcagccgaggcgaatatcggccgtc
accgtgagcgagcgcgtggccaacgagaggggcgagaacatcggagccgggagcgtcgga
taccagatcaggctcgagaccaaggccagcgcggactgcgcgctgatgttttgcaccaac
ggcgtgctgttgcgcaggctcaccagccccggcgcggacaagatgctggagtcgctttct
cacatcgtcatcgacgagctccacgagcgcgacctctttgccgactttctcaccatcgta
cttcggggcgtccttgccaggcacaggcacctgcggctcgtgctgatgtccgcgacggtt
cgcgaggatctgttcagcgactacttcggcgggtgccccgtcataagggtcccgggatac
acccacccggtggcggattaccacctggaggacattctcagcctggtcggatacggcggc
ggcggcggcggcggggtccacgactttgtttacgccgccacggcggacccggactcgccc
gagggtcaggccgtgcaggctgcgaccctggacgcggctgaagacgagatcaggcgactg
agcgcgatggagaatgcctcggcgcaaatgtcgcagtatcagatccaggcggacccggac
gaggttgacctgcaactcgcgcaggagctcatacactggatcctcacgcacagggctggt
gagatgcagacggcgcacggtggacccgcgggtgccgtgctcgtgttcctcccaggctgg
aacgaaatatcgcagctccgcgataacatggcggcggaccccaggttcagcgacggcacc
accctcgtgctccccttgcactccatggtcccgccccaggatcagaagagggtgttccag
cgccccccgaggggcgtgcgcaaggttgtcctcgcgaccaacatcgcggaaaccgcggtg
accatcgacgacgtcgtctttgtcgtggactctggccggctcaaggagaagtcgtacgac
gctcacacgggggtgtccacgcttcaggcggcgtggatctcccgcgcgtccgcgcagcag
cgacgcgggcgcgccggtcgcgtccgccccggcgagtgctaccggctgtactccacggcg
aggatgtcctcctttgcggactttcagctgccggagatgcagaggtcgccgctggaggag
ctgtgtctccaggtgcggatgctggcggaggcttcaagcctcgggggcgagcgcgggggc
ggcgcggccgccgtcgggatgggccagggttccaccgccgagtttttacttcaggcggtc
gagcccccgatcccccaggccatctcgcaggcggtggcgctgcttcaggacatcggcgcg
atgaaggacgacgagggtctgacccggctgggtaggcacctcggcgagatgccggtgcac
ccccgcgtgggtaagatgctcctgtacgcaaccttactcggagtcctcgatcccgtgttg
acggtggcgtgcgcatccgcgtacaggtccccgttcgtcgtgtccgtggac
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integrated database retrieval system
