KEGG   Micromonas commoda: MICPUN_83216
Entry
MICPUN_83216      CDS       T02695                                 
Symbol
CDH1-CCS52
Name
(RefSeq) predicted protein
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
mis  Micromonas commoda
Pathway
mis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MICPUN_83216 (CDH1-CCS52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mis04121]
    MICPUN_83216 (CDH1-CCS52)
Ubiquitin system [BR:mis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     MICPUN_83216 (CDH1-CCS52)
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_Aladin WDR55 Beta-prop_RIG_2nd eIF2A Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IFT140_2nd Peptidase_M10_C
Other DBs
NCBI-GeneID: 8244254
NCBI-ProteinID: XP_002502966
JGI: MicpuN3_83216
UniProt: C1E8V9
LinkDB
Position
6:join(1014788..1014961,1015144..1015229,1015431..1016550)
AA seq 459 aa
MSTPGTPNVKTPGGKRPTVYSDRFVPSRSASAGLQGFNLLDTGSPPASASHPNSGEREDT
SAAYSTLLRSEMLGENGASILGASPVNPSKKLFRFKSDGVLSEGINAADSPYSLSPVGGD
DALNGRHPQRRSHRKIARSPFKVLDAPALQDDFYLNLVDWSSHNVLAVGLGTCVYLWSAC
TSRVTKLCDLGPGDSVCSVGWTQRGTYLAVGTNNGEVQIWDATRCKRIRSMGGHRTRVGT
LAWSSSTLSSGSRDRNILQRDVRAPEHYTSKLSGHKSEVCGLKWSYDDRELASGGNDNQL
YVWSANSTHPLLRYSDHTAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTTTNTPLSCID
TGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPNMSKLATLTGHTLRVLYLAISPDGQT
VVTGAGDETLRFWNVFPGPKSQGSVHDNSVWSMGRTHIR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtccacgcctggcacacccaacgtaaagactccgggaggcaagcgccccacggtctac
tccgatcggttcgtgccgagccggtcggcgtccgcgggcctgcaaggattcaacctgctc
gacaccgggtctccgcccgcgagcgcttcgcatccgaactccggcgaacgagaggatacc
tccgcggcgtattcgacgcttcttcgctcggagatgctgggtgagaacggcgcatccata
ctgggcgcatcgcccgtcaatccaagtaagaagctgttcaggttcaagagcgacggcgtc
ttgtccgaagggatcaacgcggcggattcgccgtattccctctcgcccgtcggcggcgac
gacgcgctcaacggccgccacccgcagcgccggtcgcaccgcaagattgcccggtcaccg
ttcaaggtgctggacgccccggcgttgcaggacgacttctacctcaacctggtggactgg
tcctcgcacaacgtcctcgcggtgggactcggaacgtgcgtgtacctgtggagcgcgtgc
accagccgcgtgaccaagctctgcgacctgggccccggggactcggtgtgctcggtgggg
tggacgcagcggggcacgtacctggcggtgggcaccaacaacggcgaggtgcagatatgg
gacgcgacgcggtgcaagaggatacggagcatgggggggcacaggacgagggtggggacg
ctggcgtggtcgtcgtccacgctgtcgtcgggctcgcgggacaggaacatcttgcagagg
gacgttcgagcccccgagcactacaccagcaagctcagcgggcacaagtccgaggtgtgc
ggtttaaagtggagctacgacgacagggaactggcgagcggcgggaacgataaccagctc
tacgtgtggtcggcgaactcgacgcacccgctgctgaggtattctgaccacaccgcggcg
gtgaaggccatcgcgtggtcgccgcatcagcacggcctattggcgagcggcggcggcacc
gccgatcgttgcatccggttctggaacaccaccacgaacaccccgctgagctgcatagac
accggctcgcaggtgtgcaacctggtgtggagcaaaaacgtaaacgagctcgtctccacg
cacgggtactcgcagaaccagatcattgtgtggaggtaccccaacatgtccaagctcgcg
acgctgacggggcacacgctcagggtgctgtacctggcgatatctcccgacggacagacg
gtggtgacgggcgccggagacgagacgcttcggttttggaacgtgttcccggggccgaag
agccaggggagcgtgcacgacaactcggtgtggtccatgggacggacccacatacggtga

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