Micromonas commoda: MICPUN_83330
Help
Entry
MICPUN_83330 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mis
Micromonas commoda
Pathway
mis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUN_83330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_83330
Enzymes [BR:
mis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
MICPUN_83330
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
HECT type E3
MICPUN_83330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
ARM_ARMC5
Arm
PSP
Motif
Other DBs
NCBI-GeneID:
8244915
NCBI-ProteinID:
XP_002503624
JGI:
MicpuN3_83330
UniProt:
C1EAL8
LinkDB
All DBs
Position
7:join(793655..794881,795008..795932,795981..796402,796529..796682,796818..798364,798419..798577)
Genome browser
AA seq
1477 aa
AA seq
DB search
MRQDAYDHDDLDEEEYDDDEEYDEEDRDEEDEDREEDEEEDEDEQGGDEHDPSGLQALLR
RLGGGLEDMIPAAGQTRGRLKEILGGLRADGDDTRQIMALNELCELLVISSEESLITLSV
DAFVPVLVNLMQMEHNPDCMLLAARALTSMADILPNSRGAIVHYGALPAFCSRLLTIEYI
DLAEQSLQALEKLSQDHGSSCLREGAMMACLSYLDFFSLGMQRVALQTAANVCRQLPASD
CWDQLSDSVPVLTNLLMHDDARLVESACTCLTLIAANLSSQPQQLQALCSHGLIPNATRL
ISPSGSATAAPVGASTYHGLIRLIGTCCKGSADVAEQLLRNGLPGTLKSVLAGCKVLASS
TASASPASPIVSADQLLEVTTLANQLLPSIQPGSGASESPLESLGIDAAPELLREYGSNL
TSSLMQVVVASVGTNVKLQCLAALAKFLHHAPPEMLISGSAALQPGQMASFLAGLVSSRD
GAIAQVALYIVDLLMQKLPDTFSRAFRKEGTVHAIEQLCEMHAASNDGSGDSKGSSGDIT
PRGQVVPSGVGSGSAASIVARMALTNSGRKMSDTPQRRAAMDRAVSLRAAHFSAAATGGT
VERLQSVCAPLRNAGQDPLKATAVAMKFLNTLDEGEGTSTFELIESGGVEALSSFLTGSD
LPKGDGWSDSISARLSAFVRAASTDLPPRAISSLTERLLEALAVTETLPMQLSAGARAGA
GAGAAGDGLSILARPFKLRLRRASGERAELKDYASNIILVEPLATLNAIEDFLYPRVHKP
PSGPATPAGGASASGTAPTRRSGRLASGAESMDANEEEEEDHEMRGDEEEEGDGEEDFDD
EELDDEEDGEEDAPTADDVAAAAPPRLLFRAPGVGPFHPSTSVLQAIHAAALHASAAAEG
DEQGDGHEDETADAAEALAALGSVERRAALGGVLSALRGKLCDRESVANVSDATRSILTV
LSVLHTVSTSASRIINLGEQVDDVKVTALSLPADAFLSSKLAGKMVRQLQDALALCSGSL
PTWCTTLARACPFLFPFEVRQQLFYCTTFGLARALHRMHGQSQDNNGGGGGRDLRVGRLQ
RQKVRVSRQRILESAMKVYEMPGAHKMVLEVEFFNEVGTGTGPTLEFYTLMSKEVTQRSL
KAWRDAPVDGKPGPADGFVNAPHGLFPAPVSAKDFDATVPGAPGGIKRGDLFRMLGRAVG
KALQDGRLLDMALSPVFFRAVSGRTLALDDLAEVDPELGRTLSQLSAAAKRIDALKRSGA
AEKEWRAITVGGAAVEDLCLTFTLPGDDTFELMPGGAEVAVTAENLGDYVAAVVDASVGG
GISRQLDAFRGGLADVLPPVALGMFTEPEIDRMLCGQGQAWTPELLGECMTYDHGYNAQS
PPIKALVEVMCGYGPEEQRAFLRFVTGAPRLPPGGLAALQPRLTVPLSSGTTLADADLPS
AMTCASYLKLPPYSCVDVLKERLGYAITEGIGSFDLS
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggatgcctacgatcacgacgacctggatgaggaggaatacgacgacgacgag
gaatacgacgaggaggaccgcgacgaggaggacgaggaccgcgaagaggatgaagaggaa
gacgaggacgagcagggcggggacgaacacgatccctcggggcttcaggcgctcctacgt
cgcctcggcggcgggctggaggatatgatccccgccgcgggccagacacgcggccgcctg
aaggagatcctcggcggactccgcgcagatggcgacgacacccgacagatcatggcgcta
aacgagctgtgcgagctgctcgtcatctcatcagaggagtccctcatcaccctgtccgtc
gacgctttcgtgccggtgctggtgaacctcatgcagatggagcataaccccgattgcatg
ctgctcgcggcgcgcgcgctgacgtcgatggctgacatcttgcccaactcccgcggcgcc
atcgtccactacggcgcgctgcccgcgttttgcagcaggctgctcaccatcgagtacatc
gacctcgcggagcagtccctgcaagcgctggagaagctgtcgcaggaccacggatcgagc
tgcctgcgcgagggggcgatgatggcctgcctgagctacctcgattttttctcgctcggg
atgcagcgcgtggctctgcagacagcggcaaacgtgtgccgccagttgcctgccagcgac
tgctgggatcagctctcggactcggtgccagttctcactaatctgctcatgcacgatgac
gcgcggctggttgagagcgcgtgcacctgtctgacgctcatcgcggcgaacctgagctct
cagccgcagcagcttcaggcgctctgctctcacggattgattcccaacgcgacgcgcctc
atatccccctcgggctcggccacggcggcacccgtcggcgcgtcgacgtatcacggtctg
atccgtctcatcggcacgtgctgcaagggttcggctgacgtggccgagcagctgctcaga
aacgggctgccgggaaccctaaagtcagtactcgccggctgcaaagttctcgccagctcg
accgcttctgcttcgcctgcttcaccgatcgtgtcggcggatcaactcctggaggtgacg
acgttggccaaccaattgctaccctcgattcaacccggaagcggagcctctgagtcgccc
cttgagtccctgggcattgacgctgcgccggagctgcttcgcgagtacggatccaatctc
acgtcgtccctcatgcaggtggtggtcgcgtctgtcggcacaaacgtcaagcttcagtgc
ctggcggctcttgccaagtttttgcaccacgcaccacctgagatgctcatctccggatcg
gccgcgcttcagcccggacagatggcgtcgttcctggcagggttggtgtcgtctcgagac
ggagccattgctcaggtggccctgtacatcgtggacctcctcatgcaaaaactaccggat
accttcagtcgcgcgttcaggaaggaaggtacagtccacgcaattgaacagctttgcgag
atgcacgccgcgagcaacgacggttccggcgacagcaaggggtcaagtggtgacatcacc
ccgcgcggacaggtggtgccgtctggcgtcggaagtggcagcgctgcatcaatcgttgcg
aggatggcgctgacaaactctggccggaaaatgtccgacactcctcagcgccgcgctgcc
atggatcgcgccgtcagcctacgtgcagctcacttcagcgcggcagctacgggtggaaca
gttgagcgtctccagagtgtgtgcgctccgctccgtaacgccggtcaggaccccttgaag
gcgacggcggttgcaatgaagtttctcaacactctcgacgagggtgaaggaacgtcaaca
ttcgagcttatcgagagcggtggtgtcgaggcgctgagctcgtttctgacgggctccgac
ttacccaaaggagacggatggagcgattcaatttctgctcgcctgtcggcttttgtgcga
gctgcttcaacggatctcccgccgcgggccataagctctctaacggagcgacttcttgaa
gcgctggctgtaaccgagactttacccatgcagcttagcgccggtgcgagagcaggggcg
ggagcgggggcggcaggagacgggctcagcatccttgcccgtcccttcaagcttcgcctg
cgccgcgcctctggcgagcgagcggagctaaaggactacgcttccaacatcatactggtc
gagccactagccaccctcaacgccatcgaggatttcctctacccccgggtgcacaagccc
ccgtcgggtcccgcgacgccggcggggggagcctccgcatccggcaccgcgcccacccgt
cgctctggtcggctcgccagcggcgcggagagcatggacgcaaacgaggaggaagaggag
gaccacgagatgcgaggggacgaggaggaagaaggtgacggcgaggaagacttcgatgac
gaggagctggatgacgaggaggacggagaggaggacgcgcccaccgcggatgatgtggcg
gcggcagcaccgccccggctgctgttccgcgcgcccggagtgggtcccttccatccgtcg
acgagcgtgttgcaggccattcacgccgctgcgttgcacgcttcagccgcagcagaaggg
gacgagcaaggtgatggacacgaggacgagactgctgacgcggctgaggctctcgcggcg
ctcggatccgtggagcgtcgcgcggctttggggggtgttctctccgccctgcgcggcaag
ttgtgcgatcgcgagagcgttgcgaacgtatcggatgccacacgatcgattctcaccgtc
ctttcggtgttgcacacggtttcaacgtctgcgtccagaatcatcaatctcggggagcag
gttgatgacgtgaaggtgacggcactttcgcttccagcggatgcgttcctcagctccaag
ctggccggtaagatggtgcggcagctccaagacgccctggctctttgcagcggtagcttg
cccacttggtgcaccaccctggcgcgagcgtgtcctttcctgtttccttttgaggtgcgg
cagcagctcttctactgcaccacgtttggtctcgcccgcgcgcttcaccgcatgcacggc
cagtcgcaggacaacaacggtggcggaggcggacgcgacctccgtgttggtcgcctgcag
cgacaaaaggtccgcgtatctcgacagcgaattctggagtctgcgatgaaggtgtacgag
atgccgggcgcacataagatggttctcgaggttgagttctttaacgaggttggcacggga
accggacccacgctggagttttacacgctcatgtccaaggaggttacccagcgctcgctc
aaggcttggagggacgcgcccgttgacggcaagcccggtcccgccgacgggttcgtgaac
gcaccccacggattgttccccgcacccgtctctgcgaaggactttgacgcgacggtgccg
ggagcccccggcgggatcaagcgcggcgatcttttcaggatgctcggtcgcgcggtcggt
aaggctctccaggatggaaggctactcgacatggcactcagcccggtgttcttccgcgcc
gtttcaggccgcacgctcgcgttggatgacctcgcggaggtggatcctgagcttggccgc
accctgtcacagctgtccgcagccgcgaaacgcatcgacgcgctcaagagatcgggcgct
gccgagaaggagtggcgcgccataaccgtgggcggcgcagccgtggaggatttgtgcctg
acttttaccctccccggtgacgacaccttcgagttgatgcccggcggagcggaggttgcg
gtgacggcggagaacctcggcgattacgtcgccgccgtggttgacgcgtccgtcggaggc
ggcatctcgcgtcagctcgacgcgttccgtggcggcctcgcggatgtacttcctcccgtc
gcgctcggcatgtttaccgagcctgagattgaccgcatgctctgcggtcagggccaggct
tggacccccgagctgctgggcgagtgcatgacgtacgaccacgggtacaacgcccagtcc
ccgcccatcaaggctctcgtcgaggtgatgtgcggatacggtccggaagagcagcgagcg
ttcctgcgcttcgttaccggcgcgccgcgtcttcctccggggggtctggctgcgctgcag
cccaggctcacggtcccgctgtcatccgggacgacgctggcggacgccgacctgccctcc
gcgatgacgtgcgcgagctatctcaagctgccgccttacagctgcgtcgacgttctcaag
gagcgactcggttacgcgatcaccgaggggatcgggtcttttgacttgagctag
DBGET
integrated database retrieval system
