Micromonas commoda: MICPUN_84769
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Entry
MICPUN_84769 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10609
cullin 4
Organism
mis
Micromonas commoda
Pathway
mis03420
Nucleotide excision repair
mis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUN_84769
09124 Replication and repair
03420 Nucleotide excision repair
MICPUN_84769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mis04121
]
MICPUN_84769
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_84769
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_84769
Ubiquitin system [BR:
mis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
MICPUN_84769
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
MICPUN_84769
TCR (transcription coupled repair) factors
Cul4-CSA complex
MICPUN_84769
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MICPUN_84769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
ChrB_N
NrS1-pol-like_tail
KCNQ_channel
Motif
Other DBs
NCBI-GeneID:
8246283
NCBI-ProteinID:
XP_002504743
JGI:
MicpuN3_84769
UniProt:
C1ED14
LinkDB
All DBs
Position
9:complement(join(1160756..1162630,1162709..1163167))
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AA seq
777 aa
AA seq
DB search
MEDWAKRGDGNGVVANLARRVTAAKQTGGAARKLTIKPFKERPKLPADFEEDSWRMLSNA
VDAVHQKRPVSESFETLYRRVEDVCLHKLGAGLYARLRASCESHVRERVATLRGRDGAED
PVAFLNRVDDVWGDHCDATLTIRSVFLYLDRTHGDRSSSSSSVESVRSLWDMGLALFRAS
LADDTARRGTDGGAPHGDDVLGKATRGLLALVERERGGEAVDRGKVKRLTRAYRALGVYA
DRFERQFLDATRAFYRAEGTSFARNGDVGEYLAHCETRLDEEQRRCDDYLESGTRRALVQ
CVEKELVDRHVSWIVDNGFDAMMDKSDVIGLRRMHALLRRVDGGLDKLRVAFGAAVRQRG
VSIVKDEDNDRDMVTKLLELKRKADEVAEESFGGDEAFNAVVKESFESFVNQRQNRPAEL
IAKHIDVKLRGAGKGETEDELEHSLDRAMALFRHIQGKDVFEAFYKKDLAKRLLLGKSAS
NDAEKSMISRLKAECGSQFTTKLEGMFKDVDISRDVMRSFRSDSERFAKVEAAGVELYVN
VLTAGYWPTYPTVEVSLPPEMDALQGLFRDHYLGKHGGRRLVWQNSLGHCVLRAEFPKCG
VKELAVSLFQAVVCLLFNGAGPDGRLTFEEIRAASGIEDKELRRTLQSLACGKVRVLVKE
PKGRDVEDGDSFSINEQFNERLYRVKVNSIQLKETKEENAATNERVFQDRQYQIDAAIVR
IMKTRKTLSHQLLIAELLAQVKFPARPTDLKKRIESLIDREYLERDRANAQVYNYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaggactgggcgaagcgcggggacggcaacggcgtggtcgccaacctcgcgcgacgc
gtcaccgccgcgaagcaaaccggcggcgccgcgcgcaagctcaccatcaagcccttcaag
gagaggcccaagctccccgccgacttcgaggaggactcctggcgcatgctctccaacgcc
gtggacgcggtccaccagaagcggccggtgagcgaatccttcgagacgctgtatcgccgc
gtcgaggacgtgtgcctccacaagctcggcgcggggctctacgcccggctgcgcgcgtcg
tgcgagtcgcacgtcagggagagggtggcgacgctgcggggcagggacggcgccgaagat
ccggtcgctttcctcaaccgggtggacgacgtgtggggagatcactgcgacgccacgctc
acgatccgaagcgtgttcctctacctggaccgcacgcacggggatcgatcgtcgtcgtcg
tcgtccgtcgagtccgtccgatcgctctgggacatgggcctggcgctgttccgcgcgtcc
ctcgcggacgacaccgcgagacgcgggacggacggcggcgcgccccacggcgacgacgtc
ctcggcaaggcgacgcgcggcttgctcgcgctggtggagagggagaggggcggcgaggcg
gtggatcgcggcaaggtgaagcgactgacgcgagcgtatcgcgcgctcggagtctacgcc
gatcgcttcgagaggcagttcttggacgccacccgcgcattctaccgcgccgaggggacg
tcgttcgcgagaaacggcgacgtgggcgagtacctggcgcactgcgagacgaggctcgac
gaggagcagcggcggtgcgacgactacctcgagtccggtactcgccgggcgctcgttcag
tgcgtcgagaaggagctggtcgatcgccacgtgtcatggatcgtggacaacgggttcgac
gccatgatggacaagtccgacgttataggtttgcggaggatgcacgcgctgttgcgaagg
gtggatgggggtctggacaagctgagagtcgcgttcggcgcggcggttcgtcaaaggggc
gtttcaatcgtcaaagacgaggataacgacagggacatggtcacgaaactgctcgagctg
aagcgcaaggcggacgaggtggcggaggagtcgttcggcggcgacgaggcgttcaacgcg
gtcgtcaaggagtcgttcgagtcgttcgtgaaccagcggcagaacaggccggcggagctc
atcgccaagcacatcgacgtcaagctgcggggcgcgggtaagggcgagacggaggacgaa
ctggagcacagtttggacagggcgatggcgctgtttcggcacattcagggcaaggacgtg
ttcgaggcgttttacaagaaggacctcgccaagcgtctgcttctgggtaagtcggcgagc
aacgacgcggagaagagcatgatctcgcggctcaaagccgagtgcgggtcgcagttcacc
acgaagctcgagggaatgttcaaggacgtggacatctcgagggacgtgatgcgatcgttc
aggagcgactccgagcggttcgcaaaggttgaagccgcgggagtcgagctctacgtcaac
gtgctcaccgccgggtactggcccacgtatccaacggttgaggtgtcgttaccccccgag
atggacgccctacagggtttgttccgcgatcactacctcggtaaacacggcggcaggagg
ttggtgtggcagaactcgctcgggcactgcgtgttgcgcgcggagtttccaaagtgcggc
gtcaaggagctcgccgtttcgctcttccaggcggttgtgtgtctgctgttcaacggcgcc
ggacccgacgggcgcttgacgtttgaggaaatccgcgcggcgagcgggatcgaggacaaa
gagctgagacgcacgctgcagtcgctggcgtgcggcaaggttcgcgtgttggtcaaggaa
ccgaagggcagggacgtggaggatggcgactcgttctcgatcaacgaacagttcaacgag
cgcctgtaccgcgtcaaggttaactccatacagctcaaggagacgaaggaggagaacgcg
gcgacgaacgaacgggtgttccaggatcgccagtaccagatcgacgcggcgatcgttcga
atcatgaagacccgcaagaccctgtcgcaccagctgctcatcgccgagcttctcgcgcag
gtcaagttcccggctcggccgacggatctcaagaagcgaattgagagcttgatcgacagg
gagtacctcgagcgcgaccgcgccaacgcgcaggtgtacaactacctcgcctag
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