KEGG   Micromonas commoda: MICPUN_86086
Entry
MICPUN_86086      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K03021  DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
Organism
mis  Micromonas commoda
Pathway
mis03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MICPUN_86086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mis03021]
    MICPUN_86086
Enzymes [BR:mis01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     MICPUN_86086
Transcription machinery [BR:mis03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Core subunits
     MICPUN_86086
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 8247003
NCBI-ProteinID: XP_002508452
JGI: MicpuN3_86086
UniProt: C1FIF0
LinkDB
Position
10:419617..423096
AA seq 1159 aa
MRAFDKGEIKPGVHHPDWVPDCLQVDPATLNAPIKTLKDKFELLPAFLKVRGLVRQHIDS
FNYLINEEIKKIIAAKANEKVTCDTDPNFYLKYTNIQVGKPSVEEDFIVEEITPQQCRLR
DMTYAAPVTVDVEYTRGKEIVTNTSKNGVGGVTIGRIPLMLRSSRCILTGKSEEELARLG
ECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDIDNKGEVGASVTSSTHERKSKTNIVVK
HGKLYLRHNTFTDEIPIMVALKAMGCESDQEVVQMVGPDTAYASLLLPSLLECSALAIFT
QQQALEYCGGKVRMATRMMYSRNKRSKVDEARDILAGVVLAHVPVPAYDFRQKCVYVAIM
IRRILHAMVDPTQVDDKDYYGNKRLELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNR
ATQFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRIT
SQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDEEEPLRSLAH
VLGVEPLLLLVGQELHSPGSALVFLNGHILGVHQDPARFASDFRLLRRRGRVGEFVSVHT
TTGNVYIASDGGRVCRPLLIVENGELLVKQVHLDALKAGRWTFNDFLTQGFVEYLDVNEE
NNSYIALYESEITPETTHLEIEPFTLLGVCAGIIPYPHHNQSPRNTYQCAMGKQAMGNIA
FNQLNRMDTLMYLLVYPQKPIVKTKTIELIGYDRLGAGQNATVAVMSYSGYDIEDAIVMN
RASLDRGFGRCIVLRKYGCTIKKYSNRTQDRIVPPTPAQTGPNGRHRLLDKDGIAAVGEK
ISPGDVYINKQSPGNTRDPLPNPQAMPDSFYRPTAQSYKGPQGESCVVDKVMLTTSDEGQ
FNVKCLVRHTRRPEVGDKFSSRHGQKGVCGTIVEQSDLPFSERGICPDLIMNPHGFPSRM
TVGKMIELLGGKAGLQDGKFKYGTAFGGDTVTSLSEVLVEHGFSYNGKDLMHCGITGEPL
VAYIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGY
GAAMLILERLMISSDQFEAQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKL
LFQELQSMNICPRLTLSDA
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgcgcgccttcgataagggcgagatcaagcccggcgtgcaccaccccgactgggtcccc
gactgcctccaggtcgacccggcgacgctgaacgctccaatcaagaccctgaaggacaag
ttcgagctcctccccgcgttcctcaaggtcagaggcctcgtacggcagcacatcgactcg
ttcaactacctcatcaacgaagagatcaagaagatcatcgccgccaaggcgaacgagaag
gtcacgtgcgacaccgacccgaacttctacctcaagtacaccaacatccaagtgggcaag
ccatcggtggaggaggacttcatcgtggaggaaatcacgccgcagcagtgccgcctgcga
gatatgacctacgcggcgccggtcacggtggacgtggaatacacgcggggtaaggagatc
gtcacgaacaccagcaagaacggcgtcgggggggtgaccatcgggcggatacccctcatg
cttcggtccagccgctgcatcttgacggggaaatcggaagaggagctcgcgaggctcgga
gagtgcccgctggacccgggcggatacttcgtggtcaaggggaccgagaaggtgatcctg
atccaggagcagctcagcaagaacaggataatcatagacatagacaacaaaggggaggtt
ggcgcgagcgtgacgtcgagcacgcacgagcgcaagtccaagacgaacatagtggtcaag
cacgggaagctctacctccgacacaacaccttcacggacgagattcccatcatggtggcg
ctcaaggcgatggggtgcgagagcgaccaggaggtggtgcagatggtcgggccggacacc
gcgtacgcgtcgctcctgcttccttccctgctggagtgctccgcgctggccatcttcacc
cagcagcaggcgctggagtactgcggaggcaaggttcgcatggcgactcgcatgatgtac
tcgcggaacaagcggagcaaggtggacgaggccagggatatcctggcgggcgtggtgttg
gcgcacgtgcccgtgccggcgtacgatttcaggcagaagtgcgtgtacgtcgcgattatg
attcggcggattttgcacgccatggtggacccgacgcaggttgacgataaggactactac
ggcaacaagaggctcgaactcgcgggtcagctgctggcgctgctgttcgaggactgcttc
aaacggctcaacgcggacctgaagcgccaggcggacgcggtgctgagcaagagcaaccgc
gccacgcagtttgacatcatcaagtgcattcgacaggataccctgagcaacggcctggag
cacgcgatcagcagcgggaactggacggtgaagcgcttcaggatggagcgcaagggcgtg
acgcaggtgctgtccaggctgtcgttcatatccgccctggggatgatgacgaggatcacg
tcgcagtttgagaaaacccggaaggtgtccgggccgcgagcgctgcagccgtcgcagtgg
ggcatgctctgcccctcggacacgccggagggtgaatcgtgcggcttggtgaaaaacctg
gcgctcatgacccacgtcaccaccgacgacgaggaggagccccttcgctcgctcgcccac
gtcctgggcgtcgagccgctgctgctgttggtcgggcaggagctccactctccgggcagc
gccctcgtgtttctgaacggtcacatcctgggcgtccaccaggacccggctcggttcgcg
tcggactttcgtttactacgccgccgcggacgcgtcggcgagttcgtgtccgtgcacacc
acgaccgggaacgtgtacatcgcgtcggacggcggcagggtgtgcaggccgctcctcatc
gtcgagaacggcgagctactggtgaagcaggttcacctggacgcgctcaaggcggggcgg
tggacgtttaacgactttttgacgcaagggttcgtcgagtacctggacgtcaacgaggag
aataactcgtacatcgcgctgtacgagagcgagatcacgccggagacgacacacctggag
atcgagccgttcactctgctgggcgtgtgcgcgggtatcatcccgtaccctcaccacaac
cagtcgccgaggaacacgtatcagtgcgcgatggggaagcaggcgatgggaaacatcgcg
ttcaaccagctgaaccgcatggacaccctgatgtatctgctggtgtatccgcagaaaccc
atcgtgaagaccaagacgatcgagctcatcgggtacgatcgcctcggcgccggtcagaac
gccaccgtcgcggttatgtcctactcgggctacgacatcgaggacgccatcgtcatgaac
cgcgcgtcgttagacagggggttcggccggtgcatcgtgctccgaaagtacgggtgcacc
atcaagaagtactcgaacaggacccaagacaggatcgtgcccccgacgccggcgcagacg
gggcccaacggcaggcacaggctgctcgataaggatggcatcgcagccgtcggcgagaag
atctcacccggcgacgtgtacatcaacaagcagagcccgggaaacacccgcgatccgctg
cccaacccgcaggcgatgcccgactcgttctacaggcccaccgcgcagtcgtacaaaggt
cctcagggtgaatcgtgcgtggttgacaaggtgatgctgaccacgtccgacgagggacag
ttcaacgtgaagtgtttggtgcgacacacccgccgccccgaggttggcgataagttctcg
tccagacacgggcagaagggcgtttgcgggacgatcgtggagcagtcggacctacccttc
agcgagcgggggatatgcccggacttgatcatgaacccgcacgggtttcccagccgcatg
accgtgggcaagatgatcgagctgctgggcggcaaggctggcctgcaggacggaaagttc
aagtacggcacggcgtttggtggcgatacggtgacgtcactctccgaggtactcgtagag
cacggtttcagctacaacggcaaggaccttatgcattgcggcatcaccggtgaaccgctg
gtggcgtacatcttcatgggtccggtgtattaccaaaagttgaagcacatggtgctggac
aagatgcacgcgagggccaggggtccgagggtggtgctcaccaggcagccgaccgagggc
cgcgcgcgcgacggtggtttgcgcttgggcgagatggagcgcgactgcctgatcggttac
ggcgcggcaatgctgattctcgagcggttgatgatcagcagcgatcagtttgaggcgcag
gtgtgcacaaactgcggactgctggggtacaaacaccacgggacgggtcggaacctttgc
cagcagtgcgcggacgggggaacggtgagcgcgctgaagctgccgtacgcgtgcaagctg
ctgttccaggagctgcagagcatgaacatatgcccgaggctgacgctgtcggacgcgtga

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