Micromonas commoda: MICPUN_86086
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Entry
MICPUN_86086 CDS
T02695
Name
(RefSeq) predicted protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
mis
Micromonas commoda
Pathway
mis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MICPUN_86086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_86086
Enzymes [BR:
mis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MICPUN_86086
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
MICPUN_86086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
8247003
NCBI-ProteinID:
XP_002508452
JGI:
MicpuN3_86086
UniProt:
C1FIF0
LinkDB
All DBs
Position
10:419617..423096
Genome browser
AA seq
1159 aa
AA seq
DB search
MRAFDKGEIKPGVHHPDWVPDCLQVDPATLNAPIKTLKDKFELLPAFLKVRGLVRQHIDS
FNYLINEEIKKIIAAKANEKVTCDTDPNFYLKYTNIQVGKPSVEEDFIVEEITPQQCRLR
DMTYAAPVTVDVEYTRGKEIVTNTSKNGVGGVTIGRIPLMLRSSRCILTGKSEEELARLG
ECPLDPGGYFVVKGTEKVILIQEQLSKNRIIIDIDNKGEVGASVTSSTHERKSKTNIVVK
HGKLYLRHNTFTDEIPIMVALKAMGCESDQEVVQMVGPDTAYASLLLPSLLECSALAIFT
QQQALEYCGGKVRMATRMMYSRNKRSKVDEARDILAGVVLAHVPVPAYDFRQKCVYVAIM
IRRILHAMVDPTQVDDKDYYGNKRLELAGQLLALLFEDCFKRLNADLKRQADAVLSKSNR
ATQFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRIT
SQFEKTRKVSGPRALQPSQWGMLCPSDTPEGESCGLVKNLALMTHVTTDDEEEPLRSLAH
VLGVEPLLLLVGQELHSPGSALVFLNGHILGVHQDPARFASDFRLLRRRGRVGEFVSVHT
TTGNVYIASDGGRVCRPLLIVENGELLVKQVHLDALKAGRWTFNDFLTQGFVEYLDVNEE
NNSYIALYESEITPETTHLEIEPFTLLGVCAGIIPYPHHNQSPRNTYQCAMGKQAMGNIA
FNQLNRMDTLMYLLVYPQKPIVKTKTIELIGYDRLGAGQNATVAVMSYSGYDIEDAIVMN
RASLDRGFGRCIVLRKYGCTIKKYSNRTQDRIVPPTPAQTGPNGRHRLLDKDGIAAVGEK
ISPGDVYINKQSPGNTRDPLPNPQAMPDSFYRPTAQSYKGPQGESCVVDKVMLTTSDEGQ
FNVKCLVRHTRRPEVGDKFSSRHGQKGVCGTIVEQSDLPFSERGICPDLIMNPHGFPSRM
TVGKMIELLGGKAGLQDGKFKYGTAFGGDTVTSLSEVLVEHGFSYNGKDLMHCGITGEPL
VAYIFMGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRARDGGLRLGEMERDCLIGY
GAAMLILERLMISSDQFEAQVCTNCGLLGYKHHGTGRNLCQQCADGGTVSALKLPYACKL
LFQELQSMNICPRLTLSDA
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttcgataagggcgagatcaagcccggcgtgcaccaccccgactgggtcccc
gactgcctccaggtcgacccggcgacgctgaacgctccaatcaagaccctgaaggacaag
ttcgagctcctccccgcgttcctcaaggtcagaggcctcgtacggcagcacatcgactcg
ttcaactacctcatcaacgaagagatcaagaagatcatcgccgccaaggcgaacgagaag
gtcacgtgcgacaccgacccgaacttctacctcaagtacaccaacatccaagtgggcaag
ccatcggtggaggaggacttcatcgtggaggaaatcacgccgcagcagtgccgcctgcga
gatatgacctacgcggcgccggtcacggtggacgtggaatacacgcggggtaaggagatc
gtcacgaacaccagcaagaacggcgtcgggggggtgaccatcgggcggatacccctcatg
cttcggtccagccgctgcatcttgacggggaaatcggaagaggagctcgcgaggctcgga
gagtgcccgctggacccgggcggatacttcgtggtcaaggggaccgagaaggtgatcctg
atccaggagcagctcagcaagaacaggataatcatagacatagacaacaaaggggaggtt
ggcgcgagcgtgacgtcgagcacgcacgagcgcaagtccaagacgaacatagtggtcaag
cacgggaagctctacctccgacacaacaccttcacggacgagattcccatcatggtggcg
ctcaaggcgatggggtgcgagagcgaccaggaggtggtgcagatggtcgggccggacacc
gcgtacgcgtcgctcctgcttccttccctgctggagtgctccgcgctggccatcttcacc
cagcagcaggcgctggagtactgcggaggcaaggttcgcatggcgactcgcatgatgtac
tcgcggaacaagcggagcaaggtggacgaggccagggatatcctggcgggcgtggtgttg
gcgcacgtgcccgtgccggcgtacgatttcaggcagaagtgcgtgtacgtcgcgattatg
attcggcggattttgcacgccatggtggacccgacgcaggttgacgataaggactactac
ggcaacaagaggctcgaactcgcgggtcagctgctggcgctgctgttcgaggactgcttc
aaacggctcaacgcggacctgaagcgccaggcggacgcggtgctgagcaagagcaaccgc
gccacgcagtttgacatcatcaagtgcattcgacaggataccctgagcaacggcctggag
cacgcgatcagcagcgggaactggacggtgaagcgcttcaggatggagcgcaagggcgtg
acgcaggtgctgtccaggctgtcgttcatatccgccctggggatgatgacgaggatcacg
tcgcagtttgagaaaacccggaaggtgtccgggccgcgagcgctgcagccgtcgcagtgg
ggcatgctctgcccctcggacacgccggagggtgaatcgtgcggcttggtgaaaaacctg
gcgctcatgacccacgtcaccaccgacgacgaggaggagccccttcgctcgctcgcccac
gtcctgggcgtcgagccgctgctgctgttggtcgggcaggagctccactctccgggcagc
gccctcgtgtttctgaacggtcacatcctgggcgtccaccaggacccggctcggttcgcg
tcggactttcgtttactacgccgccgcggacgcgtcggcgagttcgtgtccgtgcacacc
acgaccgggaacgtgtacatcgcgtcggacggcggcagggtgtgcaggccgctcctcatc
gtcgagaacggcgagctactggtgaagcaggttcacctggacgcgctcaaggcggggcgg
tggacgtttaacgactttttgacgcaagggttcgtcgagtacctggacgtcaacgaggag
aataactcgtacatcgcgctgtacgagagcgagatcacgccggagacgacacacctggag
atcgagccgttcactctgctgggcgtgtgcgcgggtatcatcccgtaccctcaccacaac
cagtcgccgaggaacacgtatcagtgcgcgatggggaagcaggcgatgggaaacatcgcg
ttcaaccagctgaaccgcatggacaccctgatgtatctgctggtgtatccgcagaaaccc
atcgtgaagaccaagacgatcgagctcatcgggtacgatcgcctcggcgccggtcagaac
gccaccgtcgcggttatgtcctactcgggctacgacatcgaggacgccatcgtcatgaac
cgcgcgtcgttagacagggggttcggccggtgcatcgtgctccgaaagtacgggtgcacc
atcaagaagtactcgaacaggacccaagacaggatcgtgcccccgacgccggcgcagacg
gggcccaacggcaggcacaggctgctcgataaggatggcatcgcagccgtcggcgagaag
atctcacccggcgacgtgtacatcaacaagcagagcccgggaaacacccgcgatccgctg
cccaacccgcaggcgatgcccgactcgttctacaggcccaccgcgcagtcgtacaaaggt
cctcagggtgaatcgtgcgtggttgacaaggtgatgctgaccacgtccgacgagggacag
ttcaacgtgaagtgtttggtgcgacacacccgccgccccgaggttggcgataagttctcg
tccagacacgggcagaagggcgtttgcgggacgatcgtggagcagtcggacctacccttc
agcgagcgggggatatgcccggacttgatcatgaacccgcacgggtttcccagccgcatg
accgtgggcaagatgatcgagctgctgggcggcaaggctggcctgcaggacggaaagttc
aagtacggcacggcgtttggtggcgatacggtgacgtcactctccgaggtactcgtagag
cacggtttcagctacaacggcaaggaccttatgcattgcggcatcaccggtgaaccgctg
gtggcgtacatcttcatgggtccggtgtattaccaaaagttgaagcacatggtgctggac
aagatgcacgcgagggccaggggtccgagggtggtgctcaccaggcagccgaccgagggc
cgcgcgcgcgacggtggtttgcgcttgggcgagatggagcgcgactgcctgatcggttac
ggcgcggcaatgctgattctcgagcggttgatgatcagcagcgatcagtttgaggcgcag
gtgtgcacaaactgcggactgctggggtacaaacaccacgggacgggtcggaacctttgc
cagcagtgcgcggacgggggaacggtgagcgcgctgaagctgccgtacgcgtgcaagctg
ctgttccaggagctgcagagcatgaacatatgcccgaggctgacgctgtcggacgcgtga
DBGET
integrated database retrieval system