KEGG   Micromonas commoda: MICPUN_87118
Entry
MICPUN_87118      CDS       T02695                                 
Name
(RefSeq) predicted protein
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
mis  Micromonas commoda
Pathway
mis03020  RNA polymerase
mis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MICPUN_87118
  09124 Replication and repair
   03420 Nucleotide excision repair
    MICPUN_87118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mis03021]
    MICPUN_87118
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_87118
Transcription machinery [BR:mis03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MICPUN_87118
  RNA polymerase III system
   RNA polymerase III
     MICPUN_87118
  RNA polymerase I system
   RNA polymerase I
     MICPUN_87118
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MICPUN_87118
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 8248285
NCBI-ProteinID: XP_002509145
JGI: MicpuN3_87118
UniProt: C1FJT8
LinkDB
Position
12:join(1000032..1000067,1000287..1000460)
AA seq 69 aa
MIIPVRCFTCGKVIGNKWDTYLDLLQADYTERDALDALDLHRYCCRRMLMCHVDLIEKLL
NYNTLERQD
NT seq 210 nt   +upstreamnt  +downstreamnt
atgatcatccccgtgcgctgcttcacgtgcggcaaggtgatcgggaacaagtgggacacc
tacctggacctccttcaggcggactacaccgagcgagacgcgctggacgcgctggatctg
cacaggtactgctgccgtcgcatgctcatgtgccacgtcgacctcatcgagaagctcctc
aactacaacaccctggagcgccaggactga

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