Micromonas commoda: MICPUN_88662
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Entry
MICPUN_88662 CDS
T02695
Name
(RefSeq) predicted protein
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
mis
Micromonas commoda
Pathway
mis04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
MICPUN_88662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_88662
Membrane trafficking [BR:
mis04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
MICPUN_88662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Vps41
TPR_Vps41
WD40
WD40_Prp19
TPR_7
WD40_WDHD1_1st
Clathrin
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
8249303
NCBI-ProteinID:
XP_002506549
JGI:
MicpuN3_88662
UniProt:
C1EI68
LinkDB
All DBs
Position
15:complement(join(361794..362136,362185..363184,363254..363746,364008..364904))
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AA seq
910 aa
AA seq
DB search
MEEPPDPHDPGEGPRVGDNPRADEDARSESGSDASTSGSESVSEDDDDEPMLKYQRLGGA
VPAILSDDVASCACAGGNIIVLGTKRGVVIVLDRGGNELRRFTDAHRAPVNDVCLDARRE
WVGSCADDGTCAAHALYDDDDAHASSASTRVVRCEHDAGPVRSIALDPRFSSRGTRRFVR
GGDDGSLVLSASNKNGGPRRDVVLHAGEGPVRRVRWAGTLIAWANDVGVKVYDEARDRRI
AHVDRPRGSPPPGAYPPHIAWCDGARTLVIAWADCVKVAVVRTRTLTASERSGRPLRSKT
TVARFVEVVAMFQTDYFVCGIAPFGPDRLVAFAFVDGGGGEAAGDAADGEASRAPSSRPE
VRVLTWKNEDLTCDALTMKGYESFQAGDYHLAACVPDDDDRYDDRYDDASGSPSSDTAAY
YLVSPRDVLVGKPRTVADRLRWLVEERGDYEAALEACDAAVASAVPAIPRRRVRDVIADA
YLQSHLDAGDPARGASLCPRLLGTDALKWERWIARFAATPRALPHLAPYVPTEHPRLSTA
AYERVLNAFLHDRRDHARFLATVKAWAPTIYSVPSMVSAVRRKMDTGAGGDSPTLREALA
ELYLADGQRDRALRLHLELGRPSVLDFVNRHGLLPMCANMEGTTYDAPAGTNTLARLARL
DPSRAATMLADASFVKGALCVPAEVTVRALTEAVNAADVRGTRECLHLYLRELFKRDPDA
GERWHRTQPALYAEFHPEELLNFLERANGYDLADALAVCERHLLLKEQVYLLSRVGDAPM
ALDVIVEGLRDAKYAVTSELDAYADELWTGLISRVVKTAGSSPALVGNLMDALGAVDGVD
PRRVLAATPVGTEVEGARNRLRRILTRSRRAEREAEARRAEAERELAEIEAMVDAARRRA
FDDGAVEIED
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccacccgatccgcacgaccccggcgagggtccgcgggtcggcgataacccc
cgcgcggacgaggacgcgcggtccgagtctggctcggacgccagcacgtccggaagcgag
agcgtgtcggaggacgacgacgacgagccgatgctcaagtaccagcggcttgggggcgcg
gtccccgccatcctctccgacgacgtcgcgtcgtgcgcgtgcgcggggggcaatatcatc
gtcctgggcaccaagcgcggcgtcgtgatcgtcctcgaccgcggcggcaacgagctccgg
cggttcaccgacgcccatcgcgcgcccgtcaacgacgtctgcctcgacgcgcgtcgcgag
tgggtcggatcgtgcgccgacgacggcacctgcgcggcgcacgccctgtacgacgacgac
gacgcgcacgcgtcctccgcgtccacccgcgtcgtgcgatgcgagcacgacgcaggtccg
gttcggtccatcgcgctcgaccctcgattctcgtcccgcggaactcgccggttcgtccgc
ggcggcgacgacggatccctcgtcctctccgcctcgaacaagaacggcggtccccggcgc
gacgtcgtgttgcacgccggggagggtcccgtgcgacgcgtgcggtgggccgggaccctc
atcgcgtgggccaacgacgtcggcgtgaaagtttacgacgaggctcgagacagacgaata
gcgcacgtggacaggccgcggggtagcccgccgcccggcgcgtaccccccgcacatcgcg
tggtgcgacggggcgcggaccttagtcatcgcgtgggccgactgcgtcaaggtggccgtg
gtgaggacgaggacgttgacggcgtcggagaggagcgggcgaccgctccggtcgaagacg
accgtggcgcggttcgtcgaggtcgtcgccatgtttcagacggattacttcgtctgcggg
atcgcgccctttggtccggacaggctcgtggccttcgcgttcgtcgacggcgggggcggg
gaggcggcgggcgacgcggcggatggcgaggcgtcgcgcgcgccgagctcgaggccggag
gtgcgtgtgctgacgtggaaaaacgaggacctcacgtgcgacgcgctcaccatgaaaggg
tacgagtcgtttcaggctggggactaccacctcgcggcgtgcgtgcccgacgacgacgac
cgttacgacgaccgttacgacgacgcgagtggtagtccttcgtcagacacagccgcgtac
tatctcgtgtcgccgcgggacgttttggtcggtaagcctcgaaccgtcgcggacaggctt
cgatggctggtggaggagcggggcgactacgaggccgcgctggaggcgtgcgacgcggcg
gtggcgtccgccgtcccggccatccctcggcgacgcgtccgcgacgtcatcgcggacgcg
taccttcagtcgcacctcgacgcgggcgacccggcgcgcggcgcgtcgctgtgcccacgg
ctgctgggcaccgacgcgctcaagtgggagcgttggatcgcgcggttcgcggcgacgccg
agggcgctgccccacctcgcgccctacgtcccgaccgaacacccgaggctttcaaccgcc
gcgtacgagcgcgtgctgaacgcgttcctccacgaccgacgcgaccacgcgcgttttctc
gccacggtcaaggcgtgggcgcccacgatatactcggtgccgtcgatggtatcggcggtg
aggcggaagatggatacgggcgccggcggggattcgccgacgctgcgggaggcgctggcg
gagctgtacctggcggacggccaacgcgatcgggcgcttcgtctgcacctggaactcggg
cgcccgtccgtcctcgactttgtcaacaggcacgggctgctgccgatgtgcgccaacatg
gagggtactacgtacgacgccccggcaggaaccaacacgctcgcgaggttggcgaggttg
gatccgtcgcgcgcggcgacgatgctcgcggatgccagttttgtcaaaggggctttatgc
gtgcccgcggaggttacggttcgtgcgttgacggaggcggtgaacgccgcggacgtccgg
ggtacgcgcgagtgcctccacctgtacctgcgcgagctgtttaaacgggatcccgacgct
ggggagaggtggcaccgaactcagccggcgctctacgccgagtttcaccctgaggagctc
ttaaactttttggagagggcaaacgggtacgatctcgccgacgctctggccgtgtgcgag
cgccacttgttgctcaaggagcaggtgtacctgctgtcgcgcgtcggggacgcgccgatg
gcgctggacgtgatcgttgaaggcctgagggatgccaagtacgccgttacgagcgagctg
gacgcgtacgccgacgaactgtggacggggctgatatcccgcgtcgtgaagacggcgggt
tcgagtcctgccctcgtcgggaatctgatggacgcgctgggcgccgtggacggcgtggac
ccgcggcgggtgctcgccgccaccccggttggaaccgaggtggagggcgcgaggaatcgg
ctgcgacgcatcttaacgcggagtcgacgcgcggagcgagaggcggaggcgcgacgggcg
gaggcggagagggagcttgccgagattgaggcgatggtggacgcggcgaggcggcgcgcg
ttcgacgacggggcggtcgagattgaggattag
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