KEGG   Micromonas commoda: MICPUN_89348
Entry
MICPUN_89348      CDS       T02695                                 
Symbol
PHF5
Name
(RefSeq) component of splicing factor SF3B
  KO
K12834  PHD finger-like domain-containing protein 5A
Organism
mis  Micromonas commoda
Pathway
mis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUN_89348 (PHF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mis03041]
    MICPUN_89348 (PHF5)
Spliceosome [BR:mis03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    MICPUN_89348 (PHF5)
 Complex B
    MICPUN_89348 (PHF5)
 Complex C
   U2 SnRNP specific factors
    MICPUN_89348 (PHF5)
SSDB
Motif
Pfam: PHF5 DZR_2
Other DBs
NCBI-GeneID: 8250410
NCBI-ProteinID: XP_002507488
JGI: MicpuN3_89348
UniProt: C1FD91
LinkDB
Position
1:complement(join(379915..380168,380223..380298))
AA seq 109 aa
MARHHPDLIMCRKLPGIAIGRLCEKCDGRCVVCDSFVRPATLVRICDECNYGTNQGRCVI
CGGPGIADAYYCKGCTTTEKDRDGCPKIINLGSAKTDLFYERKKYGFRK
NT seq 330 nt   +upstreamnt  +downstreamnt
atggctcggcaccaccctgatttaattatgtgccgcaagctaccaggaatcgcaattggc
cggctgtgcgaaaaatgcgatggtagatgcgttgtttgcgatagcttcgtgagaccggct
actttggtgaggatctgtgacgagtgtaactacggtacgaaccagggtcgatgtgtgatt
tgcggtgggccaggcatcgcggatgcttattattgcaaagggtgcaccaccaccgagaaa
gacagagacggatgtccaaaaataatcaacctcggaagcgcgaaaacggacttgttttat
gagcggaaaaagtatggctttagaaagtga

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