Micromonas commoda: MICPUN_91523
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Entry
MICPUN_91523 CDS
T02695
Name
(RefSeq) mRNA decapping protein 2
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_91523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_91523
Enzymes [BR:
mis01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
MICPUN_91523
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_91523
mRNA degradation factors
5'-3' decay
Decapping complex
MICPUN_91523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Motif
Other DBs
NCBI-GeneID:
8245982
NCBI-ProteinID:
XP_002508068
JGI:
MicpuN3_91523
UniProt:
C1FGV3
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Position
8:join(1250584..1250652,1250798..1251805)
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AA seq
358 aa
AA seq
DB search
MAMNWQQELLAQTIAAAQPAAKKSKKAKGASVPVPKVGPNVVHSKATVAQPKMLLDNLNA
KNLPKAELLEELAARFVTNCPPEELKVFERLMFLVEQAHWYYEDFVRVEQPNLKTLRLRD
FTELMFHKVKALAHNKGRTDEIYKKFTNYKFSVPTGGVIILNPKLDKVLMVKGYKANSGW
GFPKGKINKDEPEADCAAREVTEEVGVDFRPWIKEDDSIVMFRTIDQELGLKQRSRLFIV
PGISEQTPFATLTRKEISGIAWHPLTMLAKDAGGKKYFFCKPYLQPLLQWIKNYKKKMGK
AAFATVDLGFMPATPGGDALAPAQMYTPKGAAPPGDRFPSLSNFTFDVKKVNKVMAAA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccatgaactggcagcaggagctgctcgcgcagacgatcgccgcggcacaacccgcg
gcgaagaagagcaagaaggcgaaaggggcgtcggtccccgttcccaaggttggtcccaac
gtggtgcactccaaggcgaccgtcgcccagcccaagatgctgctcgataacctcaacgcc
aagaacctgcccaaagctgagctgctggaggagctcgccgcgaggttcgtcaccaactgc
ccacccgaggagctgaaggtgttcgagcggctgatgttcctcgtcgagcaggcgcactgg
tactacgaggacttcgtgcgcgtggaacagcccaacctcaagacgctgcgcctgagggac
ttcaccgagctgatgttccacaaggtgaaggcgctcgcgcacaacaaggggcgaacggat
gaaatctacaaaaagtttaccaactacaagttcagcgtgcccaccggcggagtcatcatc
ctcaatcccaagctggacaaggtgctgatggtgaaggggtacaaggcaaactcggggtgg
ggctttcccaagggtaagatcaacaaggacgagcccgaggctgactgcgcggcgcgggag
gtgaccgaggaggttggcgtggactttcgaccgtggatcaaggaggacgactccatcgtc
atgttcaggaccatcgaccaggagctggggttgaagcagcgctcgcggttgttcatcgtg
ccgggtatcagcgaacaaaccccgttcgccaccctgaccaggaaggagatctcgggcatc
gcgtggcacccgctgacgatgctcgccaaggacgcggggggcaagaagtacttcttctgc
aagccttacctgcagcccctgctgcagtggatcaagaattacaagaagaagatgggcaaa
gcggcgttcgcgacggtggacctcggcttcatgcccgcgacaccgggcggggatgccctc
gcgccggcgcaaatgtacactcccaaaggcgcggccccaccaggtgaccggttcccttcg
ttgtcaaacttcacgtttgacgtgaaaaaggtgaacaaagtgatggcggcggcgtga
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