Micromonas commoda: MICPUN_92955
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Entry
MICPUN_92955 CDS
T02695
Name
(RefSeq) predicted protein
KO
K17302
coatomer subunit beta'
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mis04131
]
MICPUN_92955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mis04147
]
MICPUN_92955
Membrane trafficking [BR:
mis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
MICPUN_92955
Exosome [BR:
mis04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
MICPUN_92955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_SPT8
WD40_RFWD3
PEP5_VPS11_N
PH_SPO71
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
8250482
NCBI-ProteinID:
XP_002507562
JGI:
MicpuN3_92955
UniProt:
C1FDP4
LinkDB
All DBs
Position
1:complement(855321..858092)
Genome browser
AA seq
923 aa
AA seq
DB search
MPLRLDIKRKLVQRSDRVKGVELHPTEPWILANLYTGNIYIWNHQTNSLVKSFEVTELPT
RAAKWVARKQWIVCGSDDMFVRVYNYNTTELVKAFEAHNDYIRCVSVHPTLPYLLTSSDD
MLIKLWDWENNWVCTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKVWSIGQSSPNFT
LEGHEKGVNCVEYFGGGDRPYLISGADDKLVKIWDFQTKSCVQTLDGHAHNVSSVCFHPE
LPVIISGSEDGTLRIWHSLTYRLENTLNYGLERVWAIAVMKGSNSVSVGYDEGTVMFKIG
REDPVASMDTNGRIIWSKHNDIQTVNVKSLPAEYDIQDGDRLPLAIKDLGSCDLYPQSLM
HGPNGRFVTVCGDGEYVIYTALAWRNKSFGTALDFGWSVDSSEFAVRESPSKIRIYNQFK
EKTTFRPHFAAEGLYGGVLLGLRSTDFICFYDWAESRVIRRLDVSVKDVWWSDSGDFVAI
ASDSSFFILRYNAQNTTDALQKGDVDENEGVEDAFELLIEIGEIIRTAVWVGDCFIYNNA
DWRLNYCVGGEVTTIFHLDRPMYLLGYLAAQSRVYLIDKEFSVVSYTLSLSLIEYKTLIL
RGEVDAAEELLPTIPTEQYNNIARFLESRGFVADALRVATDPDYRFELATQLGELSIARG
IIENELASSVSAKWKQLGELAMSLGDIHLASSCLVNAGDLSGQLLLCSASASAVKLEELA
TLARQWGKHNVAFICLFLLNKIDDCIELLCDTGRIPEAAFMSRTYAPSKVSNVVELWKAD
LALVNRKAADALADPTEYKNLFPKFDLAMHAEEKIRSVPASSRKLARCFGEHDNLPVSKN
LIEKVDENIEVDVVPSDVDDATQICSLDTVNSRPVATASSNAQLMSNSSVVGSKVLEPVE
SAPAGEAVNSDGDDWGLDEKDAT
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgcgcttagatattaagcgaaagcttgtccagcgttccgacagagttaagggg
gtggaacttcatccaacagaaccatggatattggcgaacctttacaccggaaacatctac
atctggaaccaccagacaaattctctggtgaaatcatttgaagtcacagagctacccact
cgtgctgctaaatgggtcgcccgcaagcagtggattgtttgtggatcggatgacatgttt
gtgcgcgtctacaactacaataccacggaacttgtcaaggcattcgaagcacataatgac
tacattcgatgcgtgtctgtgcaccccaccctaccctatctcttgacaagctcagatgac
atgcttatcaaactttgggactgggaaaacaattgggtctgcactcagatttttgaaggg
cactcccactatgtgatgcaagtcgtgttcaaccccaaggatactaacacgtttgcttcg
gcctcactcgatcgaacgattaaagtctggtccattggtcagagtagcccaaacttcact
ctcgagggacatgaaaagggcgtcaactgcgttgagtattttggtggtggtgacaggccg
tacctgatttctggtgctgatgacaagctcgtaaaaatttgggattttcagacaaaatcg
tgcgtgcagactcttgatgggcatgctcacaatgtgtcttccgtttgctttcatcctgaa
ctccccgttatcatatctggctcagaagatggcactcttcgcatctggcacagcttaaca
tatcgtctcgaaaacaccctgaattatggtctggagcgagtatgggccatagctgtgatg
aagggatctaactcagtttctgtgggttatgatgaagggaccgtgatgtttaaaatcggt
cgagaagaccccgtagcctccatggacacaaatggcaggataatatggtcaaaacacaat
gatatccagacagtcaatgtcaaatctttacctgctgaatatgatattcaggacggggat
cggcttcccttggccatcaaagacctcggcagctgcgacttgtacccacaaagtctcatg
catggacctaacggtcgttttgtgacggtgtgtggagatggtgaatacgtcatctacaca
gctttagcatggcggaacaaatcttttggaacagctctggattttggatggtcagtggat
tcatctgagtttgctgtccgcgagtcgccatcgaagattagaatttacaatcagttcaag
gagaaaacaacttttcgcccacactttgccgctgaaggactttatggtggagttcttctg
ggtttaagatcgacagattttatttgtttttatgattgggcagagtctcgagtgatccgt
cgtctcgacgtgagtgtgaaagatgtttggtggtctgacagtggagattttgtggcgatc
gcaagcgactcgtcattcttcattcttcgatacaacgcccagaataccacggacgcactc
caaaaaggtgatgtcgatgaaaacgaaggtgttgaggatgcttttgagctgctgattgaa
attggagagatcattcgcactgcggtatgggtaggtgattgcttcatctacaacaatgca
gactggcgtttgaactattgcgtgggaggagaggtgaccactatctttcacttggatcga
cctatgtacttgcttggataccttgccgcgcagagccgtgtttatcttattgacaaggaa
ttctctgtcgtttcatatactctgtcattgagcctgattgagtacaagacgttgattttg
cggggagaggtcgatgctgcggaagagcttttgccgacgattccaacagagcagtacaat
aacatcgctcggtttctggaatcacgtgggtttgtggcagatgcactgcgagttgcaaca
gacccagactatcgattcgagcttgccacgcaactcggagaactcagtattgctcgagga
atcatcgaaaacgaactcgcatcatctgtgagcgccaaatggaagcaactcggagagctt
gcaatgtctttgggtgatatccaccttgcttcttcttgtctcgtcaatgccggcgatctt
tctggtcagctacttttatgctctgcttctgcttctgcagtaaaacttgaagagctcgcc
actcttgctaggcagtggggtaaacataacgttgcatttatctgtctctttctcctcaac
aaaattgatgattgcattgagctgctatgcgacactgggcgcattccagaggctgcattc
atgtctcgcacatatgccccatcgaaggtttcgaatgtcgtggagctctggaaagctgac
cttgctcttgtgaacaggaaggctgcagatgctcttgctgaccccacagagtacaaaaat
ttgtttcccaaatttgatcttgctatgcatgctgaagagaaaattcgatcagttccggct
agttcaagaaagctagcccgctgctttggagaacatgataatcttcccgtgtcaaaaaac
ctcatcgaaaaggtggacgaaaacatagaggtagatgttgttcccagtgacgttgatgat
gcgacgcaaatttgctctttggacactgtcaacagcagacctgtcgccacggcctcctca
aatgcacagctaatgtcaaacagttcagttgtcggttccaaggtactagaaccagtcgaa
agcgcaccggctggcgaagctgtgaatagtgacggcgatgactgggggcttgacgagaaa
gacgcaacctga
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