Micromonas commoda: MICPUN_93520
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Entry
MICPUN_93520 CDS
T02695
Name
(RefSeq) transcription elongation-nucleosome displacement protein
KO
K15171
transcription elongation factor SPT4
Organism
mis
Micromonas commoda
Pathway
mis03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MICPUN_93520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mis03021
]
MICPUN_93520
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_93520
Transcription machinery [BR:
mis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MICPUN_93520
RNA polymerase I system
MICPUN_93520
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MICPUN_93520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
DUF5817
Motif
Other DBs
NCBI-GeneID:
8240689
NCBI-ProteinID:
XP_002499976
JGI:
MicpuN3_93520
UniProt:
C1E040
LinkDB
All DBs
Position
2:complement(join(500905..501150,501301..501411))
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AA seq
118 aa
AA seq
DB search
MAATATNPLDTAAQPPREFMKHTRACFRCKLVKTYEQFFEEGCDNCAFFQMIDDRDRVAE
CTTPSYSGVVSVIDPKSSWTAKWLRLGKMVPGCYALEINDDMPEGIQAEIEERMEGRG
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccgcgacgaacccgctcgataccgcggcgcagcccccgagggagttcatg
aagcacactcgcgcgtgcttccgctgcaagctcgtcaagacctacgagcagttcttcgag
gaggggtgcgataactgcgcgttcttccagatgatcgacgaccgcgatcgcgtcgccgag
tgcaccacgccatcctacagcggcgtggtctcggtgatcgatccaaagagctcgtggacg
gcgaagtggctgcggctggggaagatggtgccggggtgctacgcgctggagattaacgac
gacatgccggaggggatccaggcggagatcgaggagcgcatggaaggaagagggtga
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