Micromonas commoda: MICPUN_95598
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Entry
MICPUN_95598 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_95598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_95598
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MICPUN_95598
mRNA degradation factors
5'-3' decay
Decapping complex
MICPUN_95598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
eIF-4B
Spidroin_N
Motif
Other DBs
NCBI-GeneID:
8248172
NCBI-ProteinID:
XP_002509050
JGI:
MicpuN3_95598
UniProt:
C1FJ80
LinkDB
All DBs
Position
12:join(540159..540305,540442..541113)
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AA seq
272 aa
AA seq
DB search
MAPRKKPLVKPEDAANLRVLQREDPEVEAILGSASHVTLYGFNLEEQAWHRKDCEGSLFV
VQRRSVPRFQFVVLNRLNTENVRENLLGEFEFELSPPYLLYRSSTEVNGIWFFQQEECDD
MSALFDSITSAHAKEDQQQPQLTAEGLMAAMNLGSAAAQPAQQPQPTGSVEAFFAGQLGR
GGASAAPAPIPEPLAVPVPAPTMADEPKQKREKKKEKPAAAVESGRDSPVAERGGGGGGG
GLNREVVRAAMYKLVANDNFIDLMVKELKRSM
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcggaagaagccgctggtcaagcccgaggatgcggcaaacctgcgggtgctc
cagagggaggaccccgaggtggaggccatcctgggcagcgcgagccacgtgactctgtac
gggttcaacctggaggagcaggcgtggcatcggaaagattgcgaaggctcgctcttcgtc
gtgcaacgtcgatcggtgccgaggttccagttcgtcgtgctgaaccgcctaaacaccgag
aacgtccgcgagaatctcctcggcgagtttgagtttgagctctcgccgccatacctgctc
taccgatcgtccaccgaggtcaacggcatctggttcttccagcaagaggagtgcgacgac
atgtccgccctgttcgattccatcacgagcgcgcacgccaaggaggaccagcagcagccg
cagctcacggcggagggtctgatggcggctatgaacctcggctccgccgcggctcagccg
gcgcagcaaccgcaaccgacgggcagcgtcgaggcgttcttcgcggggcagctgggcaga
ggcggcgcgagcgcggcgcccgcgccgattcccgaacccctggcggtgccggtgccggcg
ccgacgatggcggacgagcccaaacagaagagggagaagaagaaggagaagccggcggcg
gcggtagagtctgggagggactccccggttgccgagcggggcggcggcggcggcgggggc
gggctgaaccgcgaggtcgtgcgcgcggcgatgtacaagctcgtcgcgaacgataacttc
atcgacctcatggttaaggagctcaagcgctcgatgtga
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