Micromonas commoda: MICPUN_95935
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Entry
MICPUN_95935 CDS
T02695
Name
(RefSeq) predicted protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mis
Micromonas commoda
Pathway
mis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUN_95935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mis03041
]
MICPUN_95935
Enzymes [BR:
mis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUN_95935
Spliceosome [BR:
mis03041
]
Complex A
U2 snRNP components
U2 related factors
MICPUN_95935
Complex B
MICPUN_95935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
Motif
Other DBs
NCBI-GeneID:
8248968
NCBI-ProteinID:
XP_002506249
JGI:
MicpuN3_95935
UniProt:
C1EHH3
LinkDB
All DBs
Position
14:complement(join(717491..718060,718214..720049,720524..720954,721654..722008))
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AA seq
1063 aa
AA seq
DB search
MNLQSPSPRRMRGQSFSRSPAAATASTARAPARTSSPSRLTCRRRRSTSRRISRGSSAGP
RTYPRRRRRRMAAGPGCRGARRASWSSAARGRRRRRDPGAGRRPCPRRRRRRRSRSSRPS
SKRRRTDDPAPTPATTAEIQPARDDDSSQPRDRKEDAPAAEKGKDPAADLAAQMRERRER
AAAAAAPAPAPAPGAADDDDAPGVSDRRPPGWTLDADEDLAGMADEDDDDDETPRPAANK
PGTDEDEEDVDPLEAFMAANDSKPANVGLARPPVKRDDGGVKGGRAVKKIGLVRRFFDAD
SDGGDSSESGGGADSDTDGAGSDDDAEWARKQQSRMSKADKLGVADHDSIDYPPFRKNFY
IESYEIARMTKAEVKELRAELEGIRCRGKDVPRPIKTWAQAGLSNRVMELIRRSGFDKPM
PIQCQALPVIMSGRDCIGVAKTGSGKTLSYVLPMLRHVKDQRPIESGDGPIGMIMGPTRE
LVTQIGKDCKKFGRAAGLVAVSVYGGSGVATQIGELKRGCEIVACTPGRMIDVLTTGAGR
ITNLRRVTYMVLDEADRMFDMGFEPQITRIMNNLRPDRQTVMFSATFPHAMEALARSALT
NPVEIQVGGRSVVNSDIEQIVEMRAEEDRFLRVLELLGEWYERGKIIIFVASQDKCDQVF
RDLLRSGYPCLSLHGGKEQSDRECTIADFKSDVCNILVATSVAARGLDVSGLRLVVNYDT
PNHLEDYVHRVGRTGRAGNKGTAVTFISQEEEKFAPDLVKAMTDAKQPVPSDLRLMADEY
AKKKKEGLVVGGKSSGFGGSGFKFSREEQDAERRAKKAAALAAGLEVQADDESDSDDEGR
FDDDGEPIFQSVGRSGAAAAAAATTAAQAAAAEQVALLNAAARAAAAKIGSSLGVTPTAA
QGPTQAQVNAANNSQMSLAISQAANSMALVTGATTGAARAAAFAAALNAQHAAARSGVFQ
ADGAHFESELEINDFPQQARWKVTHKDTLAQISEFTGSAITVKGQYYAPNKPVPPGERKL
FLLIEGPSERCIKTAKGKIKEIIEEIIAKESLPGGFNTGKYKV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcagagcccgagcccgcggcggatgaggggccaaagtttctcgcgttcgccg
gcggcggcaaccgcctcgacggcaagagctcccgcccggacctcaagcccgtcgaggttg
acgtgccgacgacgtcgctcaacatcccgaaggatttcgagaggttcatccgcgggccca
aggacgtatccgagaagaaggaggaggaggatggcggcgggaccgggttgccgcggcgca
aggcgggcaagctggtcttcggcggcgcgaggaaggcgtcggcggagggatccgggggcg
gggcggcggccgtgcccaaggaggaggagaagaaggaggagccgaagttcaaggccgtcg
tccaagcgccggcgcaccgacgaccccgccccgacgccggcgacgacggccgagatccag
cccgcgcgcgacgacgattcgtcccaaccccgggatcggaaggaggatgcgccggcggcg
gagaaggggaaggatccggcggcggatctcgccgcgcagatgcgcgaacggcgcgagcgc
gccgccgccgccgccgccccagccccagccccagcccccggcgcggcggacgacgacgac
gccccgggggtatccgatcgcaggcccccgggctggaccctcgacgccgacgaggacctc
gcgggcatggcggacgaagacgacgacgacgacgaaacgccccggccggcggcgaacaag
ccggggacggacgaggacgaggaagacgtcgatcccctcgaggcgttcatggcggcgaac
gactccaaacccgcgaacgtcgggttggcgaggccgcccgtcaagagggacgacggcggc
gttaaaggcggacgcgctgtcaagaagatcgggctggtgagacggttcttcgacgccgat
tccgacggcggggactcgtcggagtccggcggcggcgcggattcggacaccgacggggcc
ggcagcgacgacgacgcggagtgggctcggaagcagcagtcgcggatgagcaaggcggat
aagctcggcgtcgccgaccacgactccatcgactaccccccgttccgcaagaacttttac
atcgaatcctacgagattgcgcggatgaccaaggcggaggtgaaggagcttcgcgccgag
ctggaggggatcaggtgccggggcaaggacgtcccgcgcccgatcaagacgtgggcgcag
gcgggcctgagcaaccgcgtcatggagctcatccgccgcagcggcttcgacaagcctatg
ccgatccagtgccaggcgcttcccgtgattatgtccgggcgcgactgcatcggcgtcgca
aagacgggatccggcaagacgctatcgtacgtgttacccatgctgaggcacgtcaaggac
cagcgccccatcgagagcggcgacggcccgatcggcatgatcatgggcccgacgcgcgag
ttggtgacgcagattggcaaggattgcaaaaagtttggtcgcgccgcgggtttggtggcg
gtttccgtgtacggcgggagcggcgtcgcgacgcaaattggcgaactcaagcgcgggtgc
gagattgtcgcgtgcaccccggggcgaatgatcgacgtgctgacgacgggcgccggtcga
atcaccaacttgaggcgggtgacgtacatggtgctcgacgaggcggatcgcatgttcgac
atgggctttgagccgcagatcacgcggatcatgaacaaccttcggccggacaggcagacg
gtgatgttcagcgcgacgtttccgcacgcgatggaggcgctggcgcggagcgcgctgacg
aacccggtggagattcaggtgggcggcaggtcggtggtcaactcggacatcgagcagatc
gtggagatgcgcgcggaggaggaccggttcctccgagtgctcgagctcctcggagaatgg
tacgaacgagggaaaatcatcatcttcgtggcgagtcaggacaagtgcgaccaggtgttt
cgcgacttgctgcggagcgggtacccgtgcctgtctttgcacggcgggaaggagcagagt
gatcgcgagtgcaccatcgcggatttcaaatcggacgtgtgcaacatcctcgtcgccacg
tccgtcgccgcgcgcgggctcgacgtgtcagggctcaggctcgtcgtcaactacgacact
ccgaaccacctggaggattacgtgcacagggtgggacgaacgggccgcgcgggtaacaag
ggcaccgccgtcacgttcatctcgcaggaagaggagaagttcgcgccggatctcgtcaag
gcgatgacggacgccaagcaacccgtgccgagcgacctcaggttgatggcggatgagtac
gccaagaagaagaaggagggattggtggtgggcggcaagagcagcgggttcggcgggtcc
gggttcaagttctcgagggaggagcaggacgcggagcgacgcgcgaagaaggcggcggcg
ctcgcggcgggtctggaggtgcaggcggatgacgaatccgactcggacgacgagggtcga
ttcgacgacgacggggaaccaatcttccagagcgtcgggcgatcgggcgccgccgccgcg
gcggcggcgacgaccgcggcgcaggccgccgcggccgagcaggtggctctactcaacgcc
gccgctcgtgcggccgccgccaagatcgggagctctctcggcgtgacccctacggcggcc
cagggccctacgcaggcgcaggtcaacgcggcgaacaactcgcagatgtccctcgccatc
tctcaggcggcgaacagcatggcgctggtcaccggagccaccaccggagccgcgcgagcc
gccgcgttcgccgccgcgttgaacgcgcagcacgcggcggccaggagcggtgttttccag
gcggacggggcgcacttcgagtcggagctcgagattaacgacttcccgcagcaggcgcgc
tggaaggtgacgcacaaggacacgctggctcagatttccgagtttaccggctcggcgata
accgtcaagggacaatattacgccccgaacaagcccgtgccaccgggtgagcggaagttg
ttcctgctgatcgaggggccgagcgagcggtgcatcaagacggccaaggggaagatcaag
gagatcatcgaggagatcattgcaaaggagagcctcccgggtgggttcaacaccggcaaa
tacaaggtttaa
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integrated database retrieval system
