Micromonas commoda: MICPUN_96259
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Entry
MICPUN_96259 CDS
T02695
Symbol
PF20
Name
(RefSeq) flagellar WD repeat protein PF20
KO
K24735
sperm-associated antigen 16 protein
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mis03037
]
MICPUN_96259 (PF20)
Cilium and associated proteins [BR:
mis03037
]
Motile cilia and associated proteins
Sperm associated proteins
MICPUN_96259 (PF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_NWD2_C
WD_LRWD1
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_Nup120_160
Beta-prop_WDR35_TULP_N
MIOS_WD40
LisH
Motif
Other DBs
NCBI-GeneID:
8240755
NCBI-ProteinID:
XP_002500041
JGI:
MicpuN3_96259
UniProt:
C1E0H1
LinkDB
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Position
2:complement(join(721571..723148,723265..723510))
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AA seq
607 aa
AA seq
DB search
MGNEEGDSSGDELVEVDALEESDDDFAYEEIDIDEDDPLLLAEEDDFDSALRSLAGLGGS
LVGAKDTGPPDVAPGEVVKKPEVMDDFVRNFLVKMGMTSTLEKFEAEWYELEATGRLNME
GMPQVPDVYNTNQELNGTVMSLKRELQNAKQVAHKAQSTWDKFRKERDFHRLHHKRIGQE
KNKLLDDIKKLRKHYAQYEPTIKELKRKYELAMKEKMLVRIDRDRMADKLEQFEIEQEKK
EKEAKKAERARQKAAEKAESARKKKEEEAAAIQAAAKAGGAAAKAAQQAAASPGVQMAPK
GRVFEEEKPEPCPVENFNLNKTFKGHQMSVSNLALHPRKAIIATASDDATWKMWDIPSGD
LIMSGDGHRDWVAGVDFHPAGTHLASASGDCTVKVWDFAQKRCTITFAEHTQAVWNAAFH
ESGDYIASCSLDHSVRLWDLTSAKCRLAFRGHVDSVNEVCWQPTTNNFATGSSDKTVSLW
DMRSGLCAQTLYGHLNSVNHLCFSTDGDVIVSCDADGMVKLWDVRMVAEILSVDCGPHPA
NKVAFDRASETVAVASDDGTVKCFNAADGDMVAELRGHEDAVQGVLFDPYGKYVISCGSD
ATFRLWA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgaggaaggcgactcgagcggcgacgagctcgtcgaggtcgacgcgctcgaa
gagtccgacgacgacttcgcgtacgaggagatcgacatcgacgaagatgacccgctcctg
ctggcggaggaggacgacttcgactcggcgctcaggtcgctggcgggtctgggcgggagc
ctggtcggcgccaaggacaccggcccgccggacgtcgctccgggagaggttgtcaagaag
ccggaggtgatggacgacttcgtccgcaacttcctggtcaagatgggcatgacgtcgacg
ctggagaagttcgaggccgagtggtacgagctggaggcaaccggcaggctcaacatggag
ggcatgccccaggtccccgacgtctacaacacgaaccaggagctaaacggcacggtgatg
tcgctcaagcgcgagctccagaacgccaagcaggtggcgcacaaggcccagtccacgtgg
gacaagtttcgtaaggagcgcgacttccacaggctgcaccacaagcgcatcgggcaggag
aagaacaagctcctcgacgacatcaagaagctccgcaagcactacgctcagtacgaaccg
accatcaaggagctcaagcgaaagtacgagctagcgatgaaggagaagatgctggtgcgg
atagatcgcgatcgcatggcggacaagctcgagcagttcgaaatcgagcaagagaagaag
gagaaggaggcgaagaaggctgagcgggcccggcagaaagccgcagagaaggctgagagc
gctcgaaagaagaaggaggaggaggctgcggcgatccaagccgcggccaaggctggcggc
gccgcggccaaagccgcgcagcaggcggcagcctctccgggggttcagatggcgccgaag
ggacgggtgttcgaggaggagaagcccgagccctgcccggtggagaacttcaacctgaac
aagacgttcaaggggcaccagatgtcggtgtccaacctcgcgcttcacccgcgaaaggcc
atcatcgcgacggcgtctgacgacgccacgtggaagatgtgggacattccctcgggggat
ctcatcatgagcggcgacggacacagggactgggtcgcgggcgtggacttccaccccgcc
ggtacgcacctcgcgtcggcgtcgggcgattgcaccgtgaaggtttgggactttgcgcag
aagcgatgcacgattacgtttgcggagcacacgcaggctgtgtggaacgcggctttccac
gagtccggggactacatcgcgtcgtgctcgctggatcacagcgtgcgtttgtgggacctg
acttccgccaagtgcaggctggcgttccgcgggcacgtggacagcgtcaacgaggtgtgc
tggcaacccaccacgaacaacttcgccaccggctcctcggacaagacggtttccctctgg
gacatgcggtcgggcctgtgcgctcagacgctttacgggcatctcaacagcgtgaaccac
ctgtgcttcagcaccgacggcgacgtcatcgtctcctgcgacgctgacggcatggtaaag
ctctgggacgttcgcatggttgcggagattctctcggtggactgcgggccgcacccggcg
aataaggttgctttcgacagggcgtctgagacggttgcggtggcgagcgacgacgggacg
gtgaagtgcttcaacgcggcggacggggacatggtggctgagctgagggggcacgaggat
gccgtgcagggggtgctcttcgacccctacggaaagtacgtcatctcgtgcggttcggac
gccaccttcaggctctgggcgtga
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