Micromonas commoda: MICPUN_96433
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Entry
MICPUN_96433 CDS
T02695
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair and recombination
KO
K08734
DNA mismatch repair protein MLH1
Organism
mis
Micromonas commoda
Pathway
mis03430
Mismatch repair
mis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MICPUN_96433 (MLH1)
03460 Fanconi anemia pathway
MICPUN_96433 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_96433 (MLH1)
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
MICPUN_96433 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
8244494
NCBI-ProteinID:
XP_002503207
JGI:
MicpuN3_96433
UniProt:
C1E875
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All DBs
Position
6:complement(join(527028..527153,527256..527978,528414..528790,528830..529526))
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AA seq
640 aa
AA seq
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MEPKPIHRLADEVVNRVAAGEVIHRPASALKEILENSLDAGATSIVVTVKDGGNKLLQVT
DNGCGIREADLPILCERHTTSKLSKFEDLSAMSTFGFRGEALASISFVANLTVTTMTRGA
THALKASYCDGALDGGGARPCAGNPGTTITVENLFYNVPTRRKALKSPHEEFAKVLDVVQ
RYASSRTDVAFTCRKHGEARPSLHCAVTPHRIDRLRAIYGSQVARELTPMTLTGDADGDG
DRAAEYSVDALVSTAGYHSRRTTFILFINDRLVECAPLRRACEAVYSAILPKAEKPFAYL
SLRLPPHTLDVNVHPTKREVAFLRQDEVVERVQRALERRLVEANGSRTFAVGAVVGTEEA
ELRGYDVGNGGDGNISEISPELPDGETTELTSVRELWSEITANAHVALRRVLAGLTLVGC
ADERRGLWLLQHGTKLYMARVNRLARDLFYQRVVARFGRHPCRALAEPAPIAALVRMALD
DEEVPEGVEKAKAEEAKEKIANAAAALVAEKAEMLREYFGVDVDQRARTLVGLPVLCEGH
APNLARLPEFCLSLAHEVNWEEEKPCFETCARSIASFYSGHDDEDVDEDAENVVPPGEAI
RHVLFPAIARKLVPTRASASDGTVLQVACLEQLYRVFERC
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaagcccatccaccgtctcgccgatgaggtcgtcaatcgcgtcgccgcgggc
gaggtcatccaccggcccgcgtccgcgctcaaggagatcctcgagaactcgctcgacgcg
ggcgcgacatcgatcgtggttacggtgaaggatggcggcaacaagctgctgcaggtgacg
gacaacggatgcgggatacgcgaggcggacctgcccatcctatgcgagcgccacaccacg
tccaagctgtccaagttcgaggatctcagcgcgatgtccaccttcgggttcaggggcgag
gcgctcgcgtccatctctttcgtcgcgaacctcaccgtgaccaccatgaccaggggcgcc
acgcacgcgctcaaggcgtcgtactgcgacggcgccctcgacggtggcggcgccaggcca
tgcgcgggtaaccccggcaccaccatcaccgtcgagaacctcttctacaacgtccccacc
cgacgcaaggcgctcaagtccccacacgaggagtttgccaaggttctcgacgtcgtgcag
cgatacgcgtcgtcgcgaacggacgtcgccttcacgtgcaggaaacacggcgaggcgagg
ccgtcgctgcactgcgccgtgaccccgcaccggatcgaccggctgcgtgcgatatacggc
tctcaggtggcccgcgagctcacgccgatgacgctgactggcgacgcggacggcgacggc
gaccgggcggctgagtacagcgtggacgccctggtgtccaccgcgggctaccactcccgc
cgcacgacgttcatacttttcataaacgacaggctggtggagtgcgccccgctgcgacgc
gcgtgcgaggctgtctactcggccatactcccaaaggcggagaaaccgtttgcgtaccta
tcgctgcggctcccgccgcacacgctggacgtcaacgtgcacccgacgaagagggaggtg
gcgttccttcggcaggacgaggtggtggagcgcgtgcaacgcgcgctggagcgaaggctc
gtggaggcgaacgggagcaggacgttcgccgtcggagccgtcgtcgggaccgaggaggct
gagcttcgagggtacgacgtcggaaacggcggagacggaaatatctcggaaatttctccg
gagcttccagacggggagaccacggagctcacgtccgtgcgcgagctctggtcggagatc
accgcgaacgcgcacgtcgccctccgaagggttctcgcgggtctgacgctcgttggatgc
gcggacgagcgccgggggctgtggctcctgcagcacggcacgaagctgtacatggcgcgc
gtcaatcggctggcgcgcgacctcttctaccagcgcgtcgtcgcgaggttcgggcgacac
ccgtgccgcgccctcgccgagcccgcgcccatcgcggcgctcgtgcgaatggccctggac
gacgaggaggttcccgaaggcgtggagaaggcaaaggcggaggaggccaaggagaaaatc
gcaaacgccgccgccgcgctcgtggcggaaaaggctgagatgcttcgcgagtacttcggc
gtcgacgtggaccaacgcgcgcggactctcgtgggcttacccgtgctgtgcgaaggtcac
gcgccgaacctcgcgcggctccccgagttttgcctatccctggcgcacgaggtgaactgg
gaggaggagaagccgtgctttgagacgtgcgccagatccatagcgtcgttctactcgggc
cacgacgacgaagacgtagacgaagacgccgaaaacgtcgtgccgccgggggaggctatc
cggcacgtgctcttcccggcgattgccaggaagctcgtgccgacgcgggcgagcgcgagc
gacgggacggtgctgcaggtggcgtgcctcgagcagctgtaccgggtgttcgagcggtgc
tga
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