Micromonas commoda: MICPUN_97580
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Entry
MICPUN_97580 CDS
T02695
Symbol
IFT88
Name
(RefSeq) intraflagellar transport particle protein IFT88
KO
K16474
intraflagellar transport protein 88
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mis03037
]
MICPUN_97580 (IFT88)
Cilium and associated proteins [BR:
mis03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
MICPUN_97580 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_14
TPR_8
TPR_6
TPR_11
TPR_16
TPR_9
ANAPC3
TPR_10
TPR_7
TPR_15
TPR_CcmH_CycH
SNAP
ARM_TT21_N
TPR_21
DUF4810
ARM_TT21_4th
HemY_N
NTS_TR130
TMCO5
Motif
Other DBs
NCBI-GeneID:
8244237
NCBI-ProteinID:
XP_002502949
JGI:
MicpuN3_97580
UniProt:
C1E8S7
LinkDB
All DBs
Position
6:955398..957704
Genome browser
AA seq
768 aa
AA seq
DB search
MDDDDDLYGGYTATSSSFNPAPNDDEFNYDAPTAAGGPGGPMRQGTAGGRLGTAAPARPM
TASNKAAGYSGGRPGTAVAGGPAVAGGKGPAPPLRKKPEDGPDVAIKEHEAKCHELLEAS
SRAQINKDWARAVETAREACKRERQLARVRENAGMGDSQNLELAFATQLCLGNALEGNDQ
IADAMDTYTQIVKNKAFVGGGRVRVNMGNVYFNQKDYQKAIKMYRMAIDQVPANQRWLRM
KITRNVAMAFIRMGQYVDAANTLGEIMDNEPDVHTGFQLVVCHYAVGDKDKMKRAFIALL
KLRAYESDEPDEDGDDTAGGAGLGATRRGATADDVLGDDGLRQMMREKQLEARRKILQAA
KLIGPKIAGNEELGYEFLLEEMHAHGYEFLANELEMEQALAHLRGRGANFEEGKRALKEF
EKKEHALKARAATNLSFLYFAEGDFENAEKYADMSVESNRYDASALVNKGNCMLQRGDME
GARDCYLEAVGVEADCVDAIYNLGLVNKRLEQYQDALVNFRKVISIIPNDPEATWQLADV
CELMGNRSMAIKQFDLLHARLPTDPGVLARLGALHAEAGDEAKALQCYNESHRVYPPNIP
VIEWLGTYHAQQRAYEKAHEFFAFASEVKPRDTKWPLLAASCQRRAGKLADALETYKSVH
ARNSDNAECLRHIVNILTDLGRTSEAAEYDEKLSAAESRGAGGGGDITAETQKPLIGRAK
LEMPEGGLPPDEESPHAPETPGKALNQSVMSDEFGMGGVLDDELLPGM
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgatgatctctacggtggctacaccgccacctcctcctccttcaacccc
gcgccgaacgacgacgagttcaactacgacgccccaaccgcggcgggaggacccgggggc
ccgatgcgtcagggcaccgcgggcgggaggttgggcaccgccgcccccgcgcgccccatg
accgcctcgaacaaggctgccggctactccggcggcagacccggaaccgccgtcgccggc
ggacccgccgtcgccggcggcaagggccccgcgccgcccctgcgcaagaagcccgaggac
ggtccggacgtcgccatcaaggagcacgaggccaagtgccacgagctcctcgaggcctcc
tcccgcgcgcagatcaacaaggactgggctcgcgcggtggagaccgcgagagaggcgtgc
aagcgcgagcgccagctcgcgcgcgtgcgggaaaacgccggcatgggcgactcgcagaac
ctcgagctcgccttcgccacccagctgtgcctcggcaacgcgctggagggcaacgaccag
attgcggacgcgatggacacctacacgcagatcgtcaagaacaaggcgttcgtgggcggc
gggcgcgtccgcgtgaacatgggcaacgtgtacttcaaccagaaggattaccagaaggcg
atcaagatgtacaggatggcgatcgaccaggttcccgccaaccagcgctggctgcggatg
aagatcacgcgcaacgtggccatggccttcatccgcatgggacagtacgtcgacgcggcg
aacaccctcggcgagatcatggacaacgaaccggacgttcacacgggtttccaactcgtc
gtgtgccattacgccgtgggcgacaaggacaagatgaaacgagcgttcatcgcgttgctg
aagctcagggcgtacgaatcggacgagcccgacgaggacggcgacgacacagctggcggc
gcgggtttaggtgccacgcggcgcggggccaccgcggacgacgtcctgggcgacgatggg
ttgcgccagatgatgcgcgagaagcagctcgaggcgcggcgcaagatcctccaggctgcc
aagctcatcggacccaagattgccggcaacgaggagctcgggtacgagtttttactcgag
gagatgcacgcgcacgggtacgagtttctcgcgaacgagctggagatggagcaggcgttg
gcccacctgcgaggccgcggggcaaacttcgaggagggcaagcgggccctaaaggagttc
gagaagaaggagcacgcgctgaaggcgagggcggcgactaacctgtcgttcctctacttt
gcagagggggattttgaaaacgccgagaagtacgcggacatgagcgtcgagagcaacagg
tacgacgcgagcgcgctggtgaacaagggtaactgcatgctgcagcggggagatatggag
ggcgcgagggactgttacttggaggccgtgggcgtcgaggctgactgcgtggacgcgatc
tacaacctgggtctggtcaacaagcgactggagcagtatcaggacgctttggtgaacttc
cggaaggtaatctcgatcataccgaacgaccctgaggccacttggcagctcgcggacgtg
tgcgagctcatggggaacaggtccatggcgatcaagcagttcgacctcctgcacgcgagg
cttcccaccgaccccggggtgctcgcgaggctcggtgcgcttcacgccgaggcgggtgac
gaggccaaggctctgcaatgctacaacgagtcgcacagggtctacccgccgaacattccg
gtcatcgagtggctcgggacctatcacgcgcagcagcgggcgtacgagaaggctcacgag
ttcttcgcgttcgcgtccgaggttaagccgagggataccaagtggccgctcctcgcggcg
agctgccagcgaagggcgggtaagctcgcggatgcgttggagacgtacaagagcgtccac
gcgaggaattcggacaacgcggagtgcctgcgtcacatcgtgaacatcctgacggacttg
ggacggacgtcggaggctgcagagtacgacgagaagctctcggcggcggagtcgagggga
gccggcggcggcggcgatataacagccgagacgcaaaagccgctcatcggccgcgcgaag
ctggagatgccggagggcgggctcccgccggacgaggaatcgccgcacgcgccggagacg
cccggcaaggcgctgaatcagagcgtcatgtcggacgagtttgggatgggcggcgtgctc
gacgacgagctgcttcccggaatgtga
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