Micromonas commoda: MICPUN_97868
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Entry
MICPUN_97868 CDS
T02695
Name
(RefSeq) predicted protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
mis
Micromonas commoda
Pathway
mis03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MICPUN_97868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mis03009
]
MICPUN_97868
Ribosome biogenesis [BR:
mis03009
]
Eukaryotic type
Pre-60S particles
GTPases
MICPUN_97868
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EF-G_D2
GTP_EFTU_D2
EFG_III
EFL1
EFG_IV
Motif
Other DBs
NCBI-GeneID:
8246165
NCBI-ProteinID:
XP_002504618
JGI:
MicpuN3_97868
UniProt:
C1ECC1
LinkDB
All DBs
Position
9:complement(join(672643..673352,673425..674988,675007..675711))
Genome browser
AA seq
992 aa
AA seq
DB search
MEKAVERLSGLQKFPDNIRNICVLAHVDHGKTTLSDGLIAHNGFISQKLAGKLRFMDFLD
DEQRRGITMKSAAISLLYTPKCAVGGDEAQPEPLLINLIDSPGHVDFCSEVSTAARLSDG
GLVVVDVVEGICVQTHAVLRQAWEERLQVCLVFNKLDRLIVEMGYTPTEAYERMRNLLNE
INGVMSAFVSEKFISQADTLLATSTEGGALDHGGRDDGGEGRDDEMHDDDDIESDHSTDT
FSVERGNVAFACAADGWAFRTDAFAEMYASKLGCSCTALRRGLWGDWFFSPKTRKIVGKK
AAGGKLKPLFVQCVLDPIWKLYKVAEAERHGYPPEGGKDLAAMAASLKVDVAEKDLKSAD
RKTALEAVMKAWLPLSPAILEMVAHRLPSPTGSSKRRVHRLMPAPTLKQTLAADDDAALA
ASRKAVSRCDASEGSVTTAFISKMLAAPASAVHGKSTERNGGASVFLGFGRVYSGALREG
DVVYVINGAYDPSEPDDGSCEEIVVEELYLMMGQGMFRVKEVPAGNILAVGGLDRHVLKS
ATLSSSKMCAPFGNMMFQVAPIVKVAVEPESVADMPALVEGLRLLNRSDAFVEVGLMETG
EHVIAAAGEVHLERCIADLRERFAKIDLKVSPPLVSFREGVSTTGSATVTTSNGLLTIKA
TAAPLPPFFPRVIEDSADSLKQILLSAHQKAGDAADTLVPEIMGKLNKAREAVAIDGDGS
EDVIEKTLSSAWSLGPKHVGPNLMSVGKMLDGDRGRAEKQNGIIDFSDANVVKTIEGNAL
TGFQMACERGPLCEEPLFGVTVQLEVYSKVDAEAGGDGEVGEAQYGPFSGQVASAAREAI
RKAVLKAGPRLVEAMYLSVISTTSEALGGTYSVLGRRRAKVISESIREGTGVFIIHSYLP
VAESFGFADELRQCSSGASNAQLMLSHWEHLDIDPFFKPKTEEEREEFGEDGYVGPNMAR
QLVDATRRRKGLKVEETIVKDATKQRTLSRKA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcggtcgagcgtctgtcggggttgcagaagttccccgacaacataaggaac
atttgcgtcctcgcacacgttgaccacggcaagaccaccctctccgacggcctcatagcc
cacaatgggttcatcagtcagaagctcgcggggaagttgaggttcatggacttcctggac
gacgagcagcgacggggcatcaccatgaagagcgccgcgatatccttgctttacaccccg
aaatgcgccgtgggcggggacgaggcgcaaccggaaccactgctcatcaacctcatcgac
tcaccggggcacgtcgacttctgcagcgaggtttccaccgcggctcgcctcagcgacgga
gggctcgtggtggtggacgtggtggagggcatctgcgtgcagacccacgcggtgctcagg
caggcttgggaggaacgcctgcaggtgtgcctcgtgttcaacaagctcgataggctcatc
gtcgagatgggatacactcccacggaggcgtacgagcggatgaggaacctgctcaacgag
atcaacggagtcatgagcgccttcgtctcggagaagttcatctcgcaggcggacacgctg
ctggcgacgtccacggagggaggagcgctcgatcacggcgggagggatgacggcggcgaa
gggagggacgacgagatgcacgacgacgacgacatcgaatccgaccactccaccgacacc
ttcagcgtcgagcggggcaacgtggccttcgcgtgcgccgccgacgggtgggcgtttcga
accgacgcgttcgccgagatgtacgcgtcgaaactggggtgctcgtgcacggcgctgcga
cggggactgtggggtgactggttcttcagtcccaagacgcgaaagatcgtgggtaaaaag
gcggcggggggtaagctcaagcccctgttcgtgcagtgcgtgctcgatcccatctggaag
ctgtacaaggtggccgaggcggagaggcacgggtaccctcccgagggcgggaaggacctg
gccgcgatggcggcgtccctcaaggtggacgtcgcggagaaggaccttaagagcgcggat
cggaagacggcgctggaggctgtcatgaaggcttggctgcccctgtccccggctatcctg
gagatggtggcgcaccgcctgccctccccgaccgggtcgtcaaaacgcagggtgcacagg
ctgatgccggcgccgacgctgaagcagacgctggcggcggacgacgacgccgccctcgcg
gcgtcgcgcaaggctgtgtcgaggtgcgacgcgtcggagggatccgtcacgaccgctttc
atcagtaagatgctcgcggcgccggcttcggcggttcacggaaagtcgacggaaaggaat
gggggggcgtctgtgtttctcgggttcggccgcgtgtactcgggcgcgctcagggaaggg
gacgtcgtgtacgtgatcaacggcgcgtacgatccgagcgaaccggacgacggctcctgc
gaggagatcgtcgtggaggagctgtacctgatgatgggtcagggcatgttcagggtcaag
gaggtgccggcgggaaatatcctcgccgtcggtggattggacaggcacgtgctgaagagc
gccacgctgtccagcagcaaaatgtgcgcgccgttcggaaacatgatgtttcaggtggcg
cccatcgtgaaggtcgccgtggagccggagagcgtcgcggacatgccggcgctcgttgag
ggtctgcgcctgctgaaccgctcggacgccttcgtggaggttggcctgatggagaccggg
gaacacgtcatcgcggcagctggcgaggtgcacttggagcgctgcatcgcggatcttcga
gagaggttcgccaaaatcgatttgaaggtgtcgcctcctctcgtgtccttcagggagggc
gtctcgacgactggatcggcgacggtgacgacgtcaaacgggctgctcacaatcaaggcc
accgcggcacccttgccgcctttcttcccccgtgtcatcgaggattccgctgacagtcta
aagcaaatcctgctgtcggcgcatcaaaaggcaggagacgccgcggacacgctcgtccct
gagattatgggcaagttgaacaaggcgagggaggctgttgcgattgacggcgacggctct
gaagatgttatcgagaagactctgtcatccgcttggtcgcttgggccgaagcacgtcgga
ccaaacctgatgagtgtcggcaagatgctcgatggtgatcgaggccgggctgagaaacaa
aacggaattattgatttctctgatgccaacgtggtgaaaacgatcgaagggaacgctctc
acgggatttcagatggcgtgcgagagaggtccgctctgcgaagagcccctctttggtgtg
actgttcagctcgaagtgtattcgaaggttgacgcggaggctggcggtgacggcgaggtt
ggcgaggcacagtacggaccattttctggtcaggtggccagtgccgcgagggaagccatc
cggaaggccgttctcaaggctggtccgagactggtcgaggctatgtatctctcagtcatc
agcacgacttccgaggctctgggaggcacatattctgtccttggacgcagacgggccaag
gtcatctccgagagcattcgagaggggacgggcgtgttcatcatccacagctaccttccc
gtagcagagtctttcgggttcgcggacgagcttcgacagtgtagctccggtgcgtctaat
gcgcagctcatgctcagtcattgggaacacctggacatcgaccctttcttcaagcctaaa
acggaagaggagcgcgaggagtttggggaagacggttacgtgggaccgaacatggctcgt
caactagtggatgcgacgagacgcagaaaaggactaaaggtcgaggagactatcgtcaag
gatgccacgaagcagcggacgctttcaagaaaggcatga
DBGET
integrated database retrieval system
