Micromonas commoda: MICPUN_98947
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Entry
MICPUN_98947 CDS
T02695
Name
(RefSeq) predicted protein
KO
K07573
exosome complex component CSL4
Organism
mis
Micromonas commoda
Pathway
mis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUN_98947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mis03019
]
MICPUN_98947
Messenger RNA biogenesis [BR:
mis03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MICPUN_98947
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MICPUN_98947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
8241253
NCBI-ProteinID:
XP_002499577
JGI:
MicpuN3_98947
UniProt:
C1E0K6
LinkDB
All DBs
Position
2:805717..806325
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AA seq
202 aa
AA seq
DB search
MTAPVLPGEPLRHADEVRSGPGTYVRGKSVVAAVMGHARTTPAADDADDKRPLVEVIKGP
VVTGDATGRGGGTLLPEVGDEVFARVLRINPRQVWCEIVAVNGKAVNDASGFQGIVRQQD
VRATEIDKVDMYESFLPADVIRAKVLSLGDQRSYYLTTARNELGVVQAKSPFTGEPMVPV
SWQEMMCPSTQVKVSRKVAKVD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgccggttcttcccggcgagcccctgcgccacgccgacgaggtccgctccggc
cccggaacctacgtccgggggaagagcgtcgtggcggcggtgatggggcacgcgcggaca
accccggcggctgacgacgccgacgataagcgcccgctcgtcgaggtgatcaaggggccc
gtcgtgaccggggatgcgacggggcgcgggggcggtacgctgctccccgaggtcggggac
gaggtgttcgcgcgggtactccgcatcaaccctcggcaggtgtggtgcgagatcgtcgcg
gtgaatggcaaggcggtgaacgacgcctcggggttccaagggatcgtccggcagcaggac
gtgcgggcgacggagattgacaaggtggacatgtacgagtctttcctgcccgccgacgtc
atcagggccaaggtgctgagcctcggggaccagcggagctattacctcaccacggctcgg
aacgaactcggggtggtgcaggcgaagagcccgttcacgggggagccgatggtgccggtg
tcgtggcaggagatgatgtgcccgagcacgcaggttaaggtgtccaggaaggtggccaag
gtggactga
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