Micromonas commoda: MICPUN_99013
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Entry
MICPUN_99013 CDS
T02695
Symbol
RAD54B
Name
(RefSeq) SNF2 super family
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
mis
Micromonas commoda
Pathway
mis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MICPUN_99013 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_99013 (RAD54B)
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
MICPUN_99013 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
Rad54_N
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
8240718
NCBI-ProteinID:
XP_002500010
JGI:
MicpuN3_99013
UniProt:
C1E0A3
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Position
2:complement(join(594229..594238,594312..596704))
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AA seq
800 aa
AA seq
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MAEDEEPARGAPLSPKSTNPIARPALGVRAPFKRPGGANPGAAFKKPFRSPMMNAPVDRG
VPTFVARVSETEGAPAKSSMAGQMAPLIGKPKPQVGLAAIKRLNPIATAKPMVPTPDKLY
FSCLYAKRKSAKNRSSKSWVDGIAINQHPTTTLLDMTGKIVAKGKAGTCVEGTTMEIGNW
EVEIQDSVSEDSFLSGAALAGGSTAPPPAALRAPPAVRNAAPFRPAVGSIRDGIAAASQR
RGGGLNGAAIERQPLHDPNKEGAIVMSSAGVDLPEGRSNVTVVVDPFIGRHLRPHQRDGV
RFMYECVVGLRRGGASGSIHKGCLLAHEMGMGKTLQVIALLWTLLKQGPIAGKPVVRKAV
IACPASLVGNWGGEIKKWLNDTRLEPLLVEGGEGADGKQKFEDWALPNQRRHCVLVTSYE
TLRSHAKTVQKATGGIDLLVCDEAHRLKNTKGDTQTIAALRALRCDRRVLLTGTPIQNDL
GEFFAVMDFACPGLLGDASVFKKVFSTPVEASRDKHATAEEKRIGAARSAELGRMTREFV
HRASARDVNAKHLPPKTEYVVFVRPSPVQAALYRAVLRRGARDGSQPLRALQQLQRLCNS
ASLLMRARGEGEEGEDVGGGSLSDLSSKVPEGYPDPSDPRVPAHDEAMSGKLAVLIRMLQ
GMRRGIDKTVIVSGYTSTLDIIAEACLVMGGKVSRLDGSVPPNQRVPLVNSFNAGRGGDV
FLLSTKAGGVGLNLVGANRLVLFDSDWNPANDLQALARVWRDGQKRPVTIYRLVSTGTVE
EKIFQRQMLKGDVASCMGRN
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatgaggagcccgcgcgcggggcgccgttgtcgcccaagtccaccaacccc
atcgctagacccgcgctcggcgtgagggctcctttcaagaggccgggtggtgcgaatccg
ggcgctgccttcaagaagcccttccgttcgcccatgatgaacgctcccgtcgaccgcggg
gttcccacgttcgtcgcgcgcgtatccgagaccgagggggcgcctgcgaagtcatcgatg
gccggacagatggcaccgctcataggcaagccgaagcctcaagttgggttggccgccatc
aagcgcctgaacccgattgcgaccgcgaagccgatggtgcccacgcccgacaagctctac
ttttcgtgtctctacgccaagcgcaagagtgcgaagaaccggagcagcaagtcctgggtg
gacggcatagcgattaaccaacacccgacgaccacgctcttggacatgaccggcaagatc
gtcgccaagggcaaggcgggcacgtgcgtcgaagggacgaccatggagatcggtaactgg
gaggttgagatccaggattcggtatcggaggattcgttcctgtctggagccgcgctcgcg
gggggatccacggccccgccacccgccgccctccgcgcgccacccgccgtcaggaacgcc
gctccgtttcgacccgccgtcggctcaatacgcgacggcatcgcggcggcttcgcagcga
cgcggcgggggtttgaacggggcggcgattgagagacaacccctgcacgacccgaacaag
gagggggcgatcgtgatgtcctccgcgggcgtcgacttgcccgagggcaggtccaacgtc
accgtcgtggtggacccgttcatcggccggcacctcaggccgcaccagagggacggggtc
aggttcatgtacgagtgcgtggtcggtttgcgccgcgggggcgcctcgggttcgatccac
aagggatgtctcctcgcgcacgagatgggcatgggcaagacgctgcaggtgatcgcgctg
ctgtggacgctcttgaagcagggcccgattgcggggaagccggtggtgaggaaggctgtc
atcgcgtgtcccgcgtcgctcgtgggaaactggggcggggagatcaagaagtggctcaac
gacacgaggctcgaaccgctgttagtggagggcggggagggtgccgacggcaagcagaaa
ttcgaagactgggctctgcccaaccagcggaggcactgcgtcctggtgaccagctacgag
accctgcggtcgcacgcgaagaccgtgcagaaggccaccggtggcatcgacctgctggtc
tgcgacgaggcgcaccggctgaaaaatacaaagggcgacacgcagaccatcgccgccctc
cgcgcgcttcgatgcgaccgaagggtcttactcaccggtacgccgattcagaacgacctc
ggagagttcttcgcggtcatggacttcgcgtgcccgggtttgctcggcgacgcctccgtg
tttaagaaggttttcagcacccccgtggaggcgtccagagacaagcacgccaccgccgag
gagaaacggatcggcgcggcgaggagcgcggagctcggacggatgacccgcgagttcgtg
caccgagcgtccgcgcgggacgtcaacgcgaaacatctgcccccgaagaccgagtacgtg
gtgttcgtgcgaccgagccccgtgcaggcggcgctctaccgcgccgtgctccgaaggggc
gcgcgagacgggtcgcagccgcttcgggcgcttcagcagctgcagaggctgtgcaacagt
gcctcgctgctgatgcgcgctcggggcgagggcgaggaaggcgaggacgtcggaggagga
agcctgtcggacctctcgagtaaggttccggaagggtacccggatccctcggaccccaga
gtcccggctcacgacgaggcgatgtccggcaagctggcggtgctcatccggatgctccaa
ggtatgcggcggggaatcgataagaccgtgatcgtgtccgggtacacgtccacgctggat
atcatcgccgaggcgtgcctcgtgatgggcgggaaggtttcgcggctcgacgggtccgtc
ccgcccaaccagcgcgtcccgctggtcaacagcttcaacgccggacgcggcggggatgtt
ttcttgctgagcaccaaagccggcggcgtgggtcttaatctggtgggcgcgaaccggctc
gtgctcttcgacagcgactggaaccccgcgaacgacctgcaggcgctcgcgagggtgtgg
agggacggtcagaagcgaccggtgacgatttaccgactcgtgtccaccgggactgtcgag
gagaagatattccagcggcagatgctcaagggggacgtcgcgagctgcatggggaggaac
tga
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