KEGG   Micromonas commoda: MICPUN_99199
Entry
MICPUN_99199      CDS       T02695                                 
Name
(RefSeq) SNF2 super family
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
mis  Micromonas commoda
Brite
KEGG Orthology (KO) [BR:mis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mis04121]
    MICPUN_99199
   03400 DNA repair and recombination proteins [BR:mis03400]
    MICPUN_99199
Enzymes [BR:mis01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     MICPUN_99199
Ubiquitin system [BR:mis04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    MICPUN_99199
DNA repair and recombination proteins [BR:mis03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    MICPUN_99199
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_2 zf-RING_2 DEAD zf-C3HC4 zf-RING_UBOX zf-C3HC4_3 zf-RING_5 zf-rbx1 SWI2_SNF2 zf-C3HC4_4 zf-Nse Prok-RING_4 DEAD_2 Ant_C zf-RING_10
Other DBs
NCBI-GeneID: 8241053
NCBI-ProteinID: XP_002499390
JGI: MicpuN3_99199
UniProt: C1DZH0
LinkDB
Position
2:join(55481..55776,55806..58107)
AA seq 865 aa
MPAVVPAPAPSTAHAPAPAVPVERFDEDLGTQAEDTEAEVERAVICFGAFQTYIVGVQYY
SGTVSRNEQVRLVREPKNPYDRNAIQVNNILDIKVRGIRKLVHHASGVVTTGANNKYSIP
VTLFLWGLPENKEEVIKRCRLGQLVLGNNVEPAARRVMELEPVTRTMDATEREDALDQLF
KRLEEERQSTKMATPSETITAPLYPHQKEALAWMLHRENSNALPPFWSHEEKTGMYVNIL
SSYKTSVRPQVCRGGILADDMGLGKTLNTIALIASNRPGAAPPALEEAPENDEPPTKKPK
GKTKGPGPSKNAPKVLASKQDQAGSTSSPPSRDGPKATLIVCPVSVLSNWEQQIAEHTDG
SLSVCRYHGASKTKVTDELARHDVVITTYGTLTADKGAVLNKVKWLRVVLDEAHNVKNPN
VGQSIAVRQLTAERRWAITGTPIQNRLNDLYSLLAFLRLQPLDDRSFWTRVVDKPVHAGN
PVGYDRLVTLMAAIALRRTKAQKLKDGTPLVRLPPKEVLVQTVEMGLEDRARYSNLLRAA
QETIGGMIEDGTLFGNYAHALEVILRLRQLCCHGALVPRGKNGEEKPVTPPTGEQMAQLL
TVLRAGGLDDCCICLGTMFHPVVTRCAHVFCRGCIAPALERKRSCPLCRADCEPGELVEA
PPDEDGETGDGASTGAGAAPPSAKTEALVARLKTDLRARGDGGRKAKAVVFSQFVTFIDI
AQKSVEAAGFKCVRLTGGVSAAGREKCIREFQSPDADSPDVIFVSLKAGGVGINLTAASF
VYMLDPWWNPATEDQAMDRVHRLGQDRPVKVVRFVCKDSIDEKMMELQQRKRELAKAAFV
KKTEKERQEMRKADLSLLLSLTNLV
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgcccgccgtcgtccccgcccccgcccccagcactgcccacgcccccgcccccgcggtg
ccagtcgagcgcttcgacgaggatctgggaacgcaggcggaggacaccgaggcggaggtg
gagcgcgccgtcatctgcttcggggcgttccagacctacatcgtcggcgtccagtactat
agcggcaccgtgagcaggaacgaacaggttcgtctggtccgagagcccaagaacccctac
gaccgcaacgccatccaggtgaacaacatcctggacatcaaggttcgcgggataagaaag
ctggtgcaccacgcgtccggcgtggtcaccaccggcgcgaacaacaagtactccattccg
gtcacgcttttcctctggggccttcccgagaataaggaggaggtgatcaagcggtgccgc
ctgggccagctggttctgggtaacaacgtcgaaccagccgcccggcgcgtgatggagttg
gagccggtgacgaggaccatggacgcgacggagcgcgaggatgcgctcgaccagctgttc
aagcgactggaggaggagcgccagtccaccaagatggcgacgccgagcgaaacgatcacc
gcgccgctgtacccgcaccagaaggaggcgctcgcgtggatgctgcacagggaaaacagc
aacgccttgccgccgttttggtcccacgaggaaaagacggggatgtacgtgaacatcctc
tcgtcgtacaagacctcggtcaggccgcaggtgtgccgcgggggtatcctcgcggacgat
atggggctgggcaagacgctcaacaccatcgcgctcatcgcgtccaaccgaccgggcgcg
gcgcccccggcgctcgaggaggcgcccgagaatgacgagccccccacgaagaagccgaag
gggaagacgaagggcccgggtccctcgaagaacgctcccaaggttctggcgagcaagcag
gatcaggccgggtccacatcctcgcccccttcgcgggacgggcccaaggcgacgctgatc
gtgtgcccggtctcggtcctctcaaactgggagcagcagattgcggaacacaccgacgga
agcctcagcgtgtgtcggtaccacggcgcgtcaaagaccaaggtgacggacgagttggcc
cgccacgacgtcgtcatcaccacctacgggaccctcaccgccgataagggcgccgtgctc
aacaaggttaagtggctcagggttgtgctcgacgaggctcacaacgtcaagaaccccaac
gtgggtcagtccatcgccgtcaggcagctcaccgcggagagaaggtgggccatcaccggc
acacccatacagaatcgcctcaacgacctttactccctcctcgcgttccttcgcttgcaa
ccactggacgacaggtcgttctggacccgcgtggtagataagccggtccacgccggcaac
ccggtgggatacgatcgcttggtcaccctcatggccgccatcgcgctcagacgcaccaag
gcacaaaagctgaaggacggcaccccgcttgtgcgcttgccgcccaaggaggtgttggtg
cagaccgtggagatgggtctggaggacagggcgcggtactccaatttgctcagagccgcg
caggaaaccataggaggtatgatcgaggacgggaccctgttcggcaactacgctcacgct
ctcgaggtcatccttcgtctgagacagctgtgctgccacggcgcactcgtgccccggggg
aagaacggggaagaaaagccggtgactccgccgacgggcgagcagatggctcagctgctg
acggttctccgcgcgggtggcctcgacgattgctgcatctgcctcggcacgatgttccac
cccgtggtcacccgatgcgcgcacgtgttttgccggggatgcatcgcgcccgcgctcgag
cggaagcgatcgtgcccgctctgccgcgcggactgcgagccgggtgagctcgtggaggcg
ccgccagacgaggacggggagactggcgacggggcctcgaccggcgcgggcgcggcgccc
cccagcgccaagaccgaggcgctcgtggcccggctcaagacggacctcagggcccgcggc
gacggcggtcgcaaggccaaagccgtggtgttcagccagttcgtgaccttcatcgacatc
gcgcagaagtccgtcgaggctgccgggttcaagtgcgttcgactgaccggcggcgtctcg
gcggcggggagggagaagtgcatccgggaatttcagagccccgacgcggactctccggat
gtgatcttcgtctccctcaaggctggaggcgtgggaatcaatctcaccgccgcgagcttc
gtgtacatgctggacccgtggtggaacccagcgacggaggatcaggcgatggatagggtg
cacaggctggggcaggaccggccggtgaaggtggtgaggttcgtgtgcaaggattcgatt
gacgagaagatgatggagcttcagcagcgcaagagggagctggccaaggctgcgttcgtg
aagaagacggagaaggagaggcaggaaatgcgaaaggcggacctcagcctcctcctcagc
ctcacgaatctggtctga

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