Methylomagnum ishizawai: MishRS11D_00040
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Entry
MishRS11D_00040 CDS
T07434
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_00040 (gyrB)
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_00040 (gyrB)
Enzymes [BR:
misz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MishRS11D_00040 (gyrB)
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Topoisomerases
MishRS11D_00040 (gyrB)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MishRS11D_00040 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
UFD1_N2
Motif
Other DBs
NCBI-ProteinID:
BBL72906
LinkDB
All DBs
Position
3672..6104
Genome browser
AA seq
810 aa
AA seq
DB search
MTDPMNTATQPAHDYDSTSIQVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDE
ALAGYCKNIRVIIHADESVTVTDDGRGIPVDIHEEEGRSAAEVIMTVLHAGGKFNQNSYK
VSGGLHGVGVSVVNALSELLTLEIHRGGKKYRQEYRHGEPQAPLAEFGESSDTGTRLRFK
PSDQTFTHIEFHYDILAKRLRELSFLNSGVRIVLEDERSGKSDTFEFEGGIRAFVEHLNK
NKTPLFEKVFHFLAEKDGITVEAALQWNDSYQENIFCFTNNIPQRDGGTHLAGFRAALTR
TLNQYIEEQGLLKKQKVDTTGDDAREGLTAVLSVKVPDPKFSSQTKDKLVSSEVKPVVEA
AMGEKFQEFLLEQPTTGKLIANKMIEAARAREAARKAREMTRRKTALDIAGLPGKLADCQ
EKDPALSELFLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVERARFDRMISSEEVGTLI
TALGCGIGREEYDPNKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIAQ
PPLYKVKKGKQEQYVKDDTELNHYLLQLALEKTRLHPNPQTPPIQGPGLEQLARDYLAAR
GVAQRLAHRYDATLLDLLAELPALDADTMADEARRAAWFDHLRARLNRAEPGASFEIDLR
SGGGEFHASIKKRLHGVYKAIELGAGFFNSADYKKLAAFGQITADLFGPDSFVAADEKKA
HVANFKAVFDWMMTEAKRGQHIQRYKGLGEMNPEQLFETTLDANSRRLLQVKIEDGIAAD
QIFTTLMGDQVEPRRDFIEKNALEVTNLDI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccccatgaacacagccacccaacccgcccacgattacgacagtacttccatc
caggttttgaaagggctggacgccgtccgcaagcgccccggcatgtacatcggcgacacc
gacgacggcaccgggctccaccacatggtgttcgaggtggtcgataacgccatcgacgaa
gccctggcgggctattgcaagaacatccgcgtcatcatccacgccgacgaatccgtcacc
gtcaccgacgatggccgcggcatcccggtcgatatccacgaggaggaaggccgctcggcg
gcggaagtcatcatgaccgtgctgcacgcgggcgggaagttcaaccagaattcctacaag
gtctcgggcggcctgcacggcgtgggcgtgtcggtggtgaacgcgctatcggaactcctg
accctggaaatccaccgcggcggcaagaaataccgccaggaataccgccacggcgaaccg
caagcgcccctggccgagttcggcgaatccagcgacaccggcacccggctccgcttcaag
cccagcgaccagaccttcacccatatcgagttccattacgacatcctggccaagcgcctc
cgggaactgtcgttcctgaattccggcgtccgcatcgtcctggaggacgagcgcagcggc
aaaagcgacaccttcgaattcgagggcggcatccgcgccttcgtcgagcatctcaacaag
aacaaaaccccgctgttcgagaaggtgttccacttcctggccgagaaggacggcatcacc
gtggaagccgccctgcaatggaacgattcctaccaggaaaacatcttctgcttcaccaac
aacatcccgcagcgcgatggcggcacccatctggccggtttccgcgccgccctcacccgc
accctgaaccagtacatcgaagaacagggcttgctgaaaaagcagaaggtggacaccacc
ggcgacgacgcccgcgaaggtttgaccgccgtgctgtcggtgaaggtgcccgaccccaag
ttctcctcgcagaccaaggacaagctggtgtcgtccgaggtgaagccggtggtggaagcc
gccatgggcgagaaattccaggagttcctgctggaacagcccaccaccggcaagctcatc
gccaacaagatgatcgaggccgcccgcgcccgcgaagccgcccgcaaagcccgcgaaatg
acccggcgcaagaccgccctcgatatcgcgggcctgcccggcaagctggccgattgccag
gaaaaagacccggcgctgtcggaactgttcctggtcgaaggcgattccgccggcggcagc
gccaaacaaggccgcgaccgccgcacccaggccatcctgccgctcaagggcaaaatcctc
aacgtggaacgggcgcgcttcgaccggatgatttcctcggaagaagtcgggacgctcatc
accgccctgggctgcggcatcgggcgcgaggaatacgaccccaacaagctgcgctaccac
cgcatcatcatcatgaccgacgccgacgtggacggctcgcatatccgcaccctgctgctg
accttcttctaccggcagatgccggagttgatcgagcgcggccatatctatatcgcccag
ccgccgctgtacaaggtcaagaagggcaagcaggagcaatacgtcaaggacgacaccgag
ttgaaccactacctgctgcaactcgcgctggaaaaaacccgcctgcaccccaacccccag
accccgccgatccagggtccgggcctcgaacaactggcccgcgactatctggcggcgcgg
ggcgtggcgcaacggctggcccaccgctacgacgccaccctgctcgacctgctggccgaa
ctgcccgccctggacgccgacacgatggccgacgaggcccgccgcgcggcgtggttcgac
cacctgcgagcgcggctcaaccgggcggaaccgggggccagtttcgagatcgacctgcgc
tccggcggcggcgaattccatgcctcgatcaagaagcgcctgcacggcgtctacaaggcc
atcgaactcggcgccggctttttcaattccgccgattacaaaaaactcgcggccttcggc
cagatcacggcggatttgttcggcccggacagcttcgtcgcggcggacgagaagaaagcc
catgtcgccaatttcaaagccgttttcgactggatgatgaccgaggccaagcgcggccag
catatccagcgctacaaaggcctgggcgagatgaaccccgagcaattgttcgagaccacc
ctcgacgccaacagccgccgcttgttgcaggtgaagatcgaggacggcatcgccgccgac
caaatcttcaccaccctgatgggcgaccaggtcgaaccccggcgcgatttcatcgagaag
aacgccctggaagtgacgaacctggatatttga
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