Methylomagnum ishizawai: MishRS11D_04240
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Entry
MishRS11D_04240 CDS
T07434
Symbol
clp
Name
(GenBank) CRP-like protein Clp
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
misz
Methylomagnum ishizawai
Pathway
misz02020
Two-component system
misz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MishRS11D_04240 (clp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MishRS11D_04240 (clp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
misz03000
]
MishRS11D_04240 (clp)
Transcription factors [BR:
misz03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
MishRS11D_04240 (clp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
MarR
MarR_2
HTH_28
Peptidase_M15_2
TrmB
DUF7519
HTH_11
GntR
Motif
Other DBs
NCBI-ProteinID:
BBL73326
LinkDB
All DBs
Position
494395..495051
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AA seq
218 aa
AA seq
DB search
MPIPSASPPADEALQRLLQHCHRRRYPSKATIIKPGDAGDTLYYIVEGSCTVSMHNKETG
EDIVLAYLNRGEFLGEMGVFMGSMVRDVTVRTREASQLAEIGYQRLHHLLTADLAEHAIA
ILSSLGRQVSTRLLDTSRKVRSLALLDVSGRIAHALIELSKQPDAMTHPDGMQIRVTRQE
LGRLVGCSREMAGRVLKNLEEQGLVTVKGKTIVVLGAR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcccataccttccgcgagtccgcccgccgacgaggctttgcaacggctcttgcaacac
tgccaccgccgccgctatcccagcaaggccaccatcatcaagcccggcgatgccggcgac
acgctgtattacatcgtcgaaggctcctgcacggtcagcatgcacaacaaggaaaccggc
gaggatatcgtcctggcctatctcaaccggggcgagttcctcggcgaaatgggcgtgttc
atggggagcatggtgcgcgatgtgacggtgcgcacccgcgaggccagccagttggccgaa
atcggctatcaacgcctgcaccatctcctgaccgccgatctggcggaacatgccatcgcc
atcctgtcctcgttggggcggcaggtgtcgacccgtttgctcgataccagccgcaaggtg
cggagcctcgcgctgttggacgtgtcggggcggatcgcccatgccttgatcgagttgtcc
aagcagccggacgccatgacccaccccgatgggatgcagatccgcgtcacccgccaggaa
ctcgggcgcttggtcggttgctcgcgggaaatggcggggcgggtactgaagaatctggag
gagcagggtttggtgacggtgaagggcaaaaccatcgtggtcttgggggcccgctag
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