KEGG   Methylomagnum ishizawai: MishRS11D_04570
Entry
MishRS11D_04570   CDS       T07434                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase 4 subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
misz  Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:misz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:misz03032]
    MishRS11D_04570 (parE)
   03036 Chromosome and associated proteins [BR:misz03036]
    MishRS11D_04570 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:misz02048]
    MishRS11D_04570 (parE)
Enzymes [BR:misz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MishRS11D_04570 (parE)
DNA replication proteins [BR:misz03032]
 Prokaryotic type
  DNA Topoisomerases
   MishRS11D_04570 (parE)
Chromosome and associated proteins [BR:misz03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    MishRS11D_04570 (parE)
Prokaryotic defense system [BR:misz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    MishRS11D_04570 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C HATPase_c_2
Other DBs
NCBI-ProteinID: BBL73359
LinkDB
Position
complement(532390..534282)
AA seq 630 aa
MNDNYDASSIEVLSGLDPVRKRPGMYTDTARPNHLVQEVVDNSVDEALAGFAKTIDVRLM
ADGGIEVRDDGRGMPVDIHPELGVSGVEVILTKLHAGGKFSNKNYRFSGGLHGVGVSVVN
ALSDKLEVEVRRGGKVSAMAFARGEKVQDLRIIGDAPKRDTGTTVRFWPEAHYFDTPKVA
VPRLKALLRAKAVLCPGLRISLNDEAAQETETWHYQNGLPQYLLDRIGARECVPEEPFVG
SLESRQEAADWAVAWTLDGDIVAESYVNLVPTPQGGTHVNGLRTGLTEAVREFCEFRNLL
PRGVKIAPEDVWERCHYVLSVKLQEPQFSGQTKERLSSRECAAFVSGVVKDAFSLWLNQH
PAVGERIAELVIESAQKRLKASRQVTRKKVTAGPALPGKLADCSGQDINLSELFLVEGDS
AGGSAKQARDKEYQAIMPLRGKILNTWEVEPGAVLASQEVHDISVAIGVEPGCADLTGLR
YGKVCILADADSDGNHIATLLCALFVRHFRPLVAAGHVFVAMPPLYRIDVGKQVYYALDE
SEKKGVLDRIEAEKIKGKINVQRFKGLGEMNPAQLRETTMNPDTRRLVQLTLEELAEQET
TDERLDMLLAKKRAPDRKAWLEAKGNLAVV
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgaacgacaactacgacgcctcctccatcgaagtcctatccggcctcgacccggtgcgg
aaacgccccggcatgtacaccgacaccgcccgccccaatcacttggtccaggaagtcgtc
gacaacagcgtcgacgaagccctggccggtttcgccaagaccatcgacgtgcggctcatg
gccgacggcggcatcgaagtccgcgacgatggccgcggcatgccggtcgatatccatccc
gaactcggcgtgtccggggtcgaggtgatcctgaccaaactccacgcgggcggcaaattc
tccaacaagaactaccgcttctccggcggcctgcacggcgtcggggtgtcggtggtgaac
gcgctctcggacaaactggaagtcgaggtgcgccgcggcggcaaggtctccgccatggcc
ttcgcccgcggcgagaaggtccaagacctccgcatcatcggcgacgcccccaagcgcgac
accggcaccacggtgagattctggccggaagcccattatttcgacacgcccaaggtcgcc
gtgccgaggctcaaggctttgctcagggccaaggccgtactctgccccggcttgagaatc
agcctcaacgacgaagccgcccaggaaaccgaaacctggcactatcaaaacggcctgccc
caatacctgctggatcggatcggggccagggaatgcgtgccggaagaacccttcgtcggc
agcctggaaagccgccaggaagcggcggattgggccgtggcctggacgctggacggggac
atcgtggccgagagctatgtcaacctcgtgcccaccccgcagggcggcacccatgtcaac
ggcctccgcaccggcttgaccgaggccgtgcgcgaattctgcgagttccgcaacctgttg
ccgcgcggggtgaagatcgcccctgaagacgtgtgggaacgctgccattacgtgctgtcg
gtcaaactgcaagaaccgcagttctcggggcaaaccaaggaacgcctgagttccagggaa
tgcgccgccttcgtttccggcgtggtcaaggacgccttcagcctgtggttgaaccaacac
ccggcggtgggcgagcgcatcgccgaactggtgatcgaaagcgcccagaagcgcctcaaa
gccagccgccaagtcacccgcaagaaggtcacggcgggaccggccctacccggcaagctg
gcggattgctcgggacaggacatcaacctgtccgagttgttcctggtcgagggcgattcc
gccgggggttcggccaaacaagcccgcgacaaggaataccaagccatcatgcccttgcgc
ggcaaaatcctgaacacctgggaagtcgaacccggcgcggtgctggcctcgcaggaagtc
cacgacatcagcgtcgccatcggggtggagccgggttgcgccgacctgaccgggctgcgc
tatggcaaggtctgcatcctggccgacgccgattccgacggcaaccatatcgccaccttg
ctctgcgccctgttcgtgcggcatttccggcccttggtggcggcgggccatgtgttcgtg
gcgatgccgcccttgtaccgcatcgatgtgggcaagcaggtctattacgccctggacgaa
tcggagaaaaagggcgtcctcgaccgcatcgaggccgagaagatcaagggcaagatcaac
gtgcagcgcttcaagggcctgggcgagatgaaccccgcgcaactgcgggaaaccaccatg
aaccccgacacccgccgcctggtgcaactcaccttggaggaactggcggaacaggagacc
accgacgagcgcctcgatatgctgctggcgaagaaacgcgccccggaccgcaaagcctgg
ctggaggccaagggcaatctggccgtggtgtag

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