Methylomagnum ishizawai: MishRS11D_06380
Help
Entry
MishRS11D_06380 CDS
T07434
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00470
D-Amino acid metabolism
misz00550
Peptidoglycan biosynthesis
misz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MishRS11D_06380 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MishRS11D_06380 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
misz01011
]
MishRS11D_06380 (murD)
Enzymes [BR:
misz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MishRS11D_06380 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
misz01011
]
Precursor biosynthesis
Amino acid ligase
MishRS11D_06380 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
XdhC_C
ThiF
2-Hacid_dh_C
TrkA_N
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
BBL73540
LinkDB
All DBs
Position
complement(728534..729901)
Genome browser
AA seq
455 aa
AA seq
DB search
MDHPTHPLQRLGLDRDRSRVLVVGLGKTGYSIAQCLARHGIPFAVADTREKPPLLAEFQD
NMPDVGLFLGGFQAEAFQAATHLVVSPGLPLDEPAIAAAARRGIPVMGDLDLFACLARAP
VVAITGANGKSTVTTLVGLMAEADGQRVRVGGNLGTPMLDLLDDEAELYVLELSSFQLER
SDLLEPVAATVLNISPDHMDRYPDLQAYAAAKQRIFKGEGLCVLNRDDPMVAAMADPARR
CVWFGLDGTMAVDYGVQRIEGEEWLVGHGQPLMKTKEIRIQGRHNLANALAAVALAEAVG
LSREAMIAELQRFPGLDHRMQWVAEIDGVAWINDSKATNVGACMAALAGLDRPAILIAGG
DGKGADFNLLRPVVADKVRAAVLVGKDAPLLEAALHDLIPLARAGHMREAVKAAQGLARP
GDTVLLAPACASLDQYKDYQERGRMFAEAVRGLQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaccaccccacccaccctttgcagcgtttgggattggaccgggaccgctcgcgggtc
ctggtcgtgggcctgggcaagaccggctattcgatagcccagtgcctggcccggcacggc
attcccttcgccgtggccgatacccgcgaaaaaccgccgctcctggccgaattccaggac
aatatgccggatgtcggcctgttcctgggcgggttccaggccgaagccttccaggccgcg
acccacctcgtcgtcagtcccggcctgcccctggacgaaccggccatcgccgccgccgcc
cggcgcggcatcccggtgatgggcgacttggacctgttcgcctgcttggcgcgggcgccg
gtggtcgccatcaccggggccaatggcaaaagcaccgtcaccaccctggtcggactgatg
gccgaggccgacggccagcgggtccgggtcggcggcaacctggggacgccgatgctggac
ctcctggacgacgaggccgagttgtacgtcttggaactatccagtttccaattggagcgc
tcggacctgttggagccggtcgcggccaccgtattgaatatcagccccgaccacatggac
cgctaccccgatctccaagcctacgccgccgccaaacagcgcattttcaagggcgaggga
ttgtgcgtcctgaaccgggacgatcccatggtggcggcgatggccgatcccgcccgacgc
tgcgtctggttcggcttggatggaacgatggcggtggactacggcgtccagcgtatcgag
ggcgaggaatggctggttggccatggccagcctttgatgaaaaccaaggaaatccgtatc
caaggccgtcacaaccttgccaacgccctagcggcggtggccctggccgaggcggtgggt
ttatcccgcgaagcgatgatcgcggaactccagcgctttccgggactcgaccaccggatg
caatgggtggccgaaatcgacggcgtggcctggatcaacgattccaaagccaccaatgtc
ggtgcctgcatggcggctttggcgggactggaccgccccgccatcctgatcgcgggcggc
gatggcaaaggcgcggatttcaacttgctgcggcccgtggtggcggacaaagtccgcgcc
gccgtgctggtgggcaaggacgcgcccttgctcgaagccgccttgcacgacctgattcct
ttggcgcgggcgggccatatgcgcgaagcggtcaaggccgcgcaaggcttggcccggccc
ggcgataccgtcctgttggccccggcctgcgccagtttggaccagtacaaggattaccaa
gaacgcgggcggatgttcgccgaagcggtgcgaggtttgcagtcatga
DBGET
integrated database retrieval system
