Methylomagnum ishizawai: MishRS11D_07770
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Entry
MishRS11D_07770 CDS
T07434
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03030
DNA replication
misz03430
Mismatch repair
misz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MishRS11D_07770
03430 Mismatch repair
MishRS11D_07770
03440 Homologous recombination
MishRS11D_07770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_07770
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_07770
Enzymes [BR:
misz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MishRS11D_07770
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MishRS11D_07770
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MishRS11D_07770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
LEDGF
Motif
Other DBs
NCBI-ProteinID:
BBL73679
LinkDB
All DBs
Position
859984..860598
Genome browser
AA seq
204 aa
AA seq
DB search
MIAIIDFETTGLSPDMGDRATEVAVVMLEDGQIVDRYQSLMNAGVRIPGFIQSLTGITDA
MIRKAPPAAEVMKALAQFVGNVPLVAHNASFDCKFLDAEWSRIRHRRQQEFACSLLLARR
LYPYAPDHKLGTLVRYLRLPSTGTYHRAMADAEMTAHLIVKMESDLKREYQLDTVPHELF
RVLQKAPKAQLASHVEKGKKRLGL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgatcatcgacttcgagacaaccggactatccccagacatgggagaccgagca
accgaagtagctgttgtgatgttggaggatggtcagattgttgaccgttaccaaagcctg
atgaacgcaggggttagaatacccggcttcattcaatcccttacagggatcaccgatgcc
atgatccgtaaggcaccgccagcggcggaggtgatgaaggctttggcccagttcgttggt
aacgtaccgttagtcgcacataacgcctcgttcgattgcaagttcctcgacgcggagtgg
agccgtatccggcaccggaggcaacaagagttcgcctgttccctgcttttggcgcgaagg
ctttatccctatgcacctgaccacaagctgggaacgttggtgcggtatttacgccttccc
tcgaccgggacttatcatcgcgccatggccgacgccgaaatgaccgctcacctcatcgtg
aagatggaatcggacctgaagcgcgaatatcaactcgatacagttccccacgaacttttt
cgtgtacttcagaaggcaccgaaggcacagctagcgagccatgttgaaaaaggcaaaaaa
cggcttggactatga
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