Methylomagnum ishizawai: MishRS11D_08100
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Entry
MishRS11D_08100 CDS
T07434
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00020
Citrate cycle (TCA cycle)
misz00620
Pyruvate metabolism
misz00720
Other carbon fixation pathways
misz01100
Metabolic pathways
misz01120
Microbial metabolism in diverse environments
misz01200
Carbon metabolism
misz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MishRS11D_08100
00620 Pyruvate metabolism
MishRS11D_08100
09102 Energy metabolism
00720 Other carbon fixation pathways
MishRS11D_08100
Enzymes [BR:
misz01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
MishRS11D_08100
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Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
HlyD_3
RnfC_N
NQRA_N
HlyD_D23
GCV_H
Motif
Other DBs
NCBI-ProteinID:
BBL73712
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All DBs
Position
894149..895957
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AA seq
602 aa
AA seq
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MSKVFITDTILRDAHQSLIATRLRTEDMLPICDKLDRVGYWSLEVWGGATFDACLRFLKE
DPWERLRQLRRALPHTRLQMLLRGQNLLGYRHYSDDVVREFVRLAALEGIDVFRVFDALN
DLRNLETAIAAVKEQDKHAQAAICYTLSPVHTVDLYVEQAQALAAMGADSLAIKDMAGLL
TPSATAELIAALRGAVEIPLHLHTHATCGLAEMCALKAVEHGCAHIDTAISAFAGGTSHA
PTESMVAALRGTHHETGLDLESLQEIAAYFAKVRKQYRQFESEFTGVDTRVQVNQVPGGM
MSNLAKQLEEQGALHRILEVFDEIPRVRRDLGYPPLVTPTSQIVGTQAVLNVVTGERYQS
ITNEVKRYLQGGYGKPPAPVDPDLQRRAIGQEQVIDIRPADLLKPELETLARDSGDFATS
PTDLMIYAMFPEVGKTFLVERREGRLQPEPLLPETAAAAATVQGEVPTEFKVFVHGEAYD
VQITGANISGQPRRRFYITLDGVPQEVDLEVLSGYRRGVAPSGRPIPGKPGDVVAAMPGN
IVDILVQVGDAVRAGQCVLVTEAMKMESEIQAPIAGTVAAVHAKKGDRVNPNEVLMEIVP
DA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcttcatcaccgacaccatcctgcgcgacgcccaccagtcgctcatcgcc
acccggctccgcaccgaggacatgctgcccatctgcgacaagctggaccgggtgggctac
tggtcgctggaagtctggggcggggcgaccttcgacgcctgtttgcgcttcctgaaagaa
gacccctgggaacggctgcgccaactgcgccgcgccctgccgcacacccgcttgcaaatg
ctgctgcgtggccagaatctcctgggctaccggcattattccgacgatgtggtgcgcgaa
ttcgtgcggctcgcggccctggaaggcatcgatgtgttccgggtgttcgacgcgctcaac
gaccttcgcaacctcgaaaccgccatcgcggcggtgaaggaacaagacaagcacgcccag
gcggcgatttgctacaccttgagtccggtgcatactgtggacctctatgtcgagcaggcc
caagccctggccgcgatgggcgcggatagcctcgccatcaaggatatggccgggttgctc
acgcccagcgccaccgccgaattgatcgccgccctgcgcggggcggtcgaaatccctttg
catctgcacacccatgccacctgcggcctggccgagatgtgcgccctgaaagccgtggaa
cacggctgcgcccatatcgacacggcgatttcggccttcgcgggcggcaccagccacgcg
cccaccgaaagcatggtcgcggccctgcgcggcacccatcacgaaaccgggctggatttg
gaatcgctccaggagatcgccgcctatttcgccaaggtgcgcaagcaataccgccagttc
gagagcgaattcaccggggtcgatacccgcgtccaggtcaaccaggtgccgggcgggatg
atgtcgaacttggcgaagcaattggaagagcagggcgctttgcaccgtatcctggaagta
ttcgacgaaatccccagggtgcggcgcgatttgggctatccgcccttggtgacgccgact
tcgcagatcgtcggcacccaggcggtgctgaacgtggtcacgggcgagcgctaccaatcc
atcaccaacgaggtgaaacgctatctgcaaggcggttatggcaagcccccggccccggtc
gatcccgatttgcagcggcgggccatcggccaggagcaggtgatcgacatccgtccggcg
gatttgctcaagcccgaactcgaaaccctggcgcgggatagcggcgacttcgccaccagc
ccgaccgatttgatgatctacgccatgttcccggaagtggggaagaccttcttggtcgag
cgccgggaaggccgtttgcagcccgaacccttgttgccggaaaccgccgccgccgccgcc
acggtccagggcgaggtgcccaccgagttcaaggtgttcgtgcatggcgaagcctacgat
gtccagatcaccggcgccaatatcagcggacaaccccggcggcgcttctatatcaccttg
gacggcgtgccgcaggaagtcgatttggaagtgctgagcggctaccggcgcggggtcgcg
cccagcggcaggccgattcctgggaagcccggcgatgtggtcgcggccatgcccggcaat
atcgtcgatatcctggtccaggtcggcgacgcggtgcgggccgggcagtgcgtcttggtg
acggaggccatgaagatggaatcggaaatccaagcgcccatcgccggcacggtggcggcg
gtccatgccaagaaaggcgaccgggtgaatcccaacgaagtgttgatggaaatcgtcccg
gatgcctga
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