Methylomagnum ishizawai: MishRS11D_08140
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Entry
MishRS11D_08140 CDS
T07434
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
misz03021
]
MishRS11D_08140 (rpoH)
Transcription machinery [BR:
misz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MishRS11D_08140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
GntR
HTH_3
HTH_25
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
BBL73716
LinkDB
All DBs
Position
898352..899206
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AA seq
284 aa
AA seq
DB search
MSNALTLPVNPALGSIEEYVATVNRMPRWDAEQEHELALRFRDENDLEAARLLVLGNLRF
VVHIAKGYLGYGLPLPDLIQEGNIGLMKAVKRYDPEVGVRLVSFAVHWIRAEIHEFIIQN
WRIVKVATTKAQRKLFFNLRKFKPRLGWFTHDEATAVADELGVDVDTVYEMESRLSQQDM
AFDQPLDADADEKDVSAPVHYLQQDNADPAALLEDNDWGEHKQQRLLAAIEQLDDRSRDI
VTSRWLSEQKLTLHDLAARYNVSAERIRQLENTAMKRLKTSLAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcattaacccttccggtcaatcccgcgctgggttccatcgaagagtacgtc
gccacggtcaaccgtatgccgcgttgggatgccgagcaagaacacgaactcgccctgcgt
ttccgcgacgagaacgatctggaggccgcccgcctgttggtgctgggcaatctccgcttc
gtggtgcatatcgccaaagggtatctgggctacggtttgccgctgcccgacctgatccag
gagggcaatatcggcctgatgaaggccgtgaagcgctacgaccccgaggtcggcgtgcgc
ctggtgtcgttcgcggtgcattggatccgggccgaaatccacgaattcatcatccagaac
tggcgcatcgtcaaggtcgccaccaccaaggcccagcgcaagctgttcttcaacctcagg
aaatttaagccgcgcctgggttggttcacccacgacgaggccacggcggtggccgacgaa
ctcggggtggacgtggatacggtctacgagatggaaagccgcctgagccagcaggacatg
gccttcgaccagccgctcgacgccgacgccgacgagaaggacgtgtcggccccggtgcat
tacctgcaacaggacaacgccgaccccgccgcgctgttggaagacaacgattggggcgag
cataagcaacagcgcctcctggccgccatcgagcaattggacgaccgcagccgcgacatc
gtgaccagccgctggctgagcgagcagaagctgaccctgcacgatctggcggcccggtac
aacgtctccgccgagcgcatccgccagctcgagaacaccgccatgaagcggctgaaaacc
tcgctggcggcttga
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