Methylomagnum ishizawai: MishRS11D_14710
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Entry
MishRS11D_14710 CDS
T07434
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_14710
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_14710
Enzymes [BR:
misz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MishRS11D_14710
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Topoisomerases
MishRS11D_14710
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MishRS11D_14710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Intein_splicing
Hint
Motif
Other DBs
NCBI-ProteinID:
BBL74373
LinkDB
All DBs
Position
1608777..1613051
Genome browser
AA seq
1424 aa
AA seq
DB search
MSLFFNALPCYPARPSRRDTVAQSRKPSMTSFAKEIIPVNLEDEMKQSYLDYAMSVIVGR
ALPDVRDGLKPVHRRVLYAMHELGNDWNKPYKKSARIVGDTIGKLHPHGDVAVYDTIVRM
AQHFSLRYTLIDGQGNFGCFTGDTRIKLADGTEKSFAELAQLPPDQVFYVYAVNRYGRIV
IAEGRYSRITRPGAALLELTLDNGETIRCTPDHRFMLRDGSYKEAKDLTPEDSLMPGVFD
TAPIKPGLNHYLRVLQPDSGQYEFVHQLADEFNARKGIAAQMSGAFVRHHRNFNRWDNSP
PNIQRLGFLEHLHIHAAQIKELWKDPEFREAQKHGVRRFYAENPEVLEQRRRRFIRQNQD
EDFRRQNGPRMADGLKRHFSERPQAREAISARMQALWQDEEYRERMSEALSGIEKRPLSD
EEKARVAAIISEKSKAMWGDDAKRVEIVEAISRAMADPGIRAKISRAVRRHWENPEYRAK
FPSGHFSRMAEAVWDKPETREMHRDKISRQRQDAEFRTAQRQGVQRSNARRIQDNPSMMR
EISDKAVLALRESWRDPNHRSQVIRRKIAGYVYGLLKAFPEQDFTPELYESQRHQNWIPH
IGKAVEYFGDFNTLADAGRHYNHRIVAKREPAETADTYDITVDEHHNFLLAANVFVHNSV
DGDPPAAMRYTEVRMARIAHELLADLDKETVDFIPNYDESEREPTVLPTRIPNLLINGSA
GIAVGMATNIPPHNLGEVIDACLHLIEQPETSIQDLMRYVPGPDFPTFGLINGAGGIREA
YLTGRGRIYLRARCEFEEDGHRTSIVVHELPYQVNKAKLQEKIAELAKEGRLGGISGLRD
ESDKDGMRLVIELKRGESAEVVLNNLYQLTAMQTVFGINMVALIDGRPRCLNLKEFLAAF
IDHRREVVTRRTLFDLRKARERAHILEGLAVALANIDAVIELIKTSPSPAVAKERLLEPV
WRPGVVMELLARAEDAIRSRPETLPALFGLGDQGYRLSPEQAQAILELRLHRLTGLEQDK
IIAEYREILAKIDEFLAILGSDIRLMEVIREELAAIREQFADPRRTRIIEDHLDLSRADL
ITEEDMVVTVSHEGYVKSQPLTAYRAQRRGGRGKAAATTKEEDFIEKLIVANTHDTILCF
SSVGKVYWLKVYELPVASRTSRGKPFVNLLPLEEGERINAILPIREFDEGHFIFMATASG
IVKKVALKEFERPRSLGKIAIDLRQDDRLVDVAITDGQQHVMLFSDAGKAVCFDEDDVRV
MGRGAAGVRGMALGDDQKIIALIIGTEGSVLNITEKGYGKRTDIADFPRHRRGGQGVIAI
QTHERNGAVVGAVLVNESDELMLITDGGTLVRTRVEEIRELGRNTQGVMVIRLNPGEKVV
GVDRIPMLEGESDDIAETGEETAGTDPTEINPINQEGESDGEGV
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctttttcaacgcgctaccgtgctacccggcccgcccgagccgccgggacacc
gtcgcccagagccgcaagccctccatgacttccttcgccaaagaaatcatcccggtcaac
ctcgaagacgaaatgaagcagtcctacctcgattacgccatgagcgtgatcgtgggccgg
gcgcttcccgacgtgcgggacgggctgaagcccgtgcatcgccgcgtcctctatgccatg
cacgaactgggcaacgattggaacaagccttataagaaatcggcccgtatcgttggcgat
actataggcaaactgcatccacacggagatgtggcggtttatgatactattgtacgcatg
gcgcagcatttttccttgcgctataccttaatagatggacaaggtaatttcggatgtttc
acgggagacacccgcatcaaactggccgatggcaccgaaaagagcttcgccgagttggcc
cagttgccgccggaccaagtgttttatgtttacgcggtcaatcgatacggtcggatcgtc
atcgccgaaggccgctattcccgcatcacccgccccggtgccgcgctgttggaactcacc
ctggataatggcgaaaccatccgttgcacgccggaccaccgcttcatgctgcgcgatggt
tcttataaggaggccaaagacctcacgcccgaagatagcttgatgccgggggtgttcgac
accgcgccgatcaagccgggactgaaccattatctgcgggtgttgcagccggactcgggg
caatacgaattcgtccatcaactggcggatgaattcaacgcccgcaaaggtatagccgcc
cagatgtccggagcttttgtccggcatcatcgcaatttcaaccgctgggacaatagcccg
cccaatatccagcgcctagggttcctcgaacacctgcatatccacgccgcgcaaatcaag
gagctatggaaagacccggaattccgggaagcccagaaacacggcgtgcggcggttctat
gccgagaatccggaggttttggaacaacggcggcggcggtttatccgccagaaccaagac
gaagatttccggcggcaaaacggtccccgcatggcggacgggttgaagcgtcatttctcc
gaacggccccaggcccgcgaggcgatttccgcccggatgcaagctttgtggcaggacgag
gaataccgcgagcgcatgtccgaggcattgagcggcatagaaaaacgcccgctctcggac
gaagaaaaagcgcgggtcgccgcgatcatttccgagaaaagcaaggcgatgtggggcgac
gacgccaaacgggtggaaatcgtcgaggccatatcccgcgccatggccgatcctggcatc
cgggccaagatcagccgggcggtcaggcggcattgggaaaacccggagtatcgcgccaag
ttcccgtccgggcatttttcgcgtatggctgaagccgtttgggacaagccggaaacgcgg
gaaatgcaccgcgacaagatttcccggcaacggcaggatgcggaattccgcaccgcgcaa
aggcagggggtgcaacgcagcaacgcccgtcgcatccaggataatccatccatgatgcgg
gagatcagcgataaggccgttctggccttgcgtgaaagctggcgcgacccgaatcatcgc
tcgcaggtaatacgccggaaaatcgccggttatgtctatggcttgctaaaggcgtttccc
gaacaggatttcacgcccgaattatacgaatcccagcgccatcaaaactggattccccat
atcgggaaggccgtggaatatttcggcgatttcaatacgttggcggatgccggaaggcac
tataaccaccggatcgtcgccaagcgtgaacccgcggaaactgcggatacctacgatatt
acggtggatgaacaccataatttcttgctcgcggccaacgtgttcgtgcataactccgtc
gatggcgatccacctgccgcgatgcgttacacagaagtccgcatggcccgtatcgctcac
gagctgctcgccgatctcgacaaggaaaccgtcgatttcatccccaactacgacgaatcc
gagcgggaacccacggtcctccccacccggattcccaacctgctgatcaatggctcggcc
ggcatcgcggtcggcatggcgaccaatatcccgccacacaacctgggcgaggtcatcgac
gcgtgcctgcaccttatcgaacagccggaaaccagcatccaggatttgatgcggtacgtc
cccggcccggatttccccacctttgggctcatcaacggggctggcggcatccgcgaggct
tacctgaccgggcggggccgcatctacctccgcgcccgttgcgaattcgaggaggacggc
caccgcaccagtatcgtggtccatgaactgccctaccaagtcaacaaggccaagctccag
gaaaaaatcgccgaactcgccaaggagggacgcctgggcgggatttccggtttgcgcgac
gaatccgacaaggacggaatgcgtttggtgatcgaactcaaacgcggcgagtcggcggaa
gtggtgctgaataacctgtaccaactgaccgcgatgcagaccgtgttcggcatcaatatg
gtggctttgatcgatggccgtccgcgctgcctgaacctcaaggaattcctggccgccttc
atcgaccaccgccgcgaggtcgtgacccggcgcactttgttcgatctgcgcaaggcccgc
gagcgcgcccatatcctggaaggcctggccgtggccctcgccaatatcgacgcggtcatc
gaactcatcaagacctcgcccagccccgccgtggcgaaagagcggttgttggagccggta
tggcgtccgggcgtggtgatggaactgttggcacgggccgaggacgccatccgctcccgt
cccgaaaccctgcccgccctgttcggcctgggcgatcaaggctaccgcctgtcgcccgaa
caggcccaggccattttggaattgcgcctgcaccgcctgaccggcctggaacaagacaaa
atcatcgccgaataccgcgaaatcctcgccaagatcgacgaattcctggcgatcctgggc
agcgatatccggctgatggaagtcatccgcgaggaactcgccgccatccgcgagcaattc
gccgacccgcgccgcacccgcatcatcgaggaccatctcgacctcagccgcgccgacctc
atcaccgaggaagacatggtcgtcaccgtgtcgcacgagggctatgtgaaatcccagccg
ctcacggcctaccgcgcccaacgccgcggcggtcgcggcaaggcggcggcgaccaccaag
gaagaggatttcatcgagaagctgatcgtggccaatacccacgacaccatcctgtgtttc
tccagcgtcggcaaggtgtattggctcaaggtctacgaactgccggtggcgagccggacc
tcgcgcggcaagcccttcgtgaacctattgcccctggaagaaggcgagcgcatcaacgcc
atcctgccgatccgcgagttcgacgaaggccatttcatcttcatggcgaccgcgtccggc
atcgtcaagaaggtggcgctgaaggaattcgagcggccccgcagcctgggcaagatcgcc
atcgacctgcgccaggacgaccgtttggtcgatgtcgccatcaccgacggccagcagcat
gtcatgctgttcagcgacgcgggcaaggcggtgtgcttcgacgaggacgatgtgcgggtc
atggggcgcggcgcggcgggcgtgcgcggcatggccttgggcgacgaccagaagatcatc
gccctcatcatcggcaccgaaggctcggtgctgaacatcaccgaaaagggctatggcaag
cgcaccgatatcgccgatttccccaggcaccgccggggcgggcaaggcgtcatcgccatc
cagacccacgagcgcaacggcgcggtggtgggcgcggtgctggtgaacgaaagcgatgaa
cttatgctgattaccgatggcggcaccctggtccgcacccgggtcgaggaaatccgcgaa
ctgggccgcaacacccagggtgtgatggtgatccgcctcaatccgggcgagaaagtggtg
ggcgtggaccgtattccgatgctggaaggcgagtccgacgatatcgccgagaccggcgaa
gaaaccgccgggaccgatccgaccgaaatcaatccgattaaccaagaaggagagagcgat
ggcgagggtgtataa
DBGET
integrated database retrieval system
