Methylomagnum ishizawai: MishRS11D_16290
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Entry
MishRS11D_16290 CDS
T07434
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00541
Biosynthesis of various nucleotide sugars
misz01100
Metabolic pathways
misz01250
Biosynthesis of nucleotide sugars
Module
misz_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MishRS11D_16290 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
misz01005
]
MishRS11D_16290 (kdsB)
Enzymes [BR:
misz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
MishRS11D_16290 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
misz01005
]
Lipid A
MishRS11D_16290 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
BBL74531
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Position
complement(1797636..1798409)
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AA seq
257 aa
AA seq
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MAGFKIVIPARHGSTRLPGKPLLPVAGKPMIAHVCERALEAGDEVFLATDDERIREAVAD
LPVQALLTRPDHASGTERIAEVADALGWPDDAIVVNLQGDEPLMRPALIRELAAALAGQT
AARVATLAAPIGEVAEVFDPNAVKVVTDAQGYALYFSRAPIPWHRASFGQAGPGLPEDFP
WLRHIGIYAYSAGFLRDYVRWPASRLEAVEALEQLRILWRGERIRVLPVDEAPEAGIDTE
ADWRRVEAVLAGRNPAG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccggcttcaagatcgtcatcccggcccgccatggctcgacccgtttgcccggcaag
cctttgctgccggtggcgggcaagccgatgatcgcccatgtgtgcgagcgggcgctggaa
gccggggacgaggtgttcctcgccaccgacgacgagcgcatccgcgaggccgtggcggat
ttgccggtccaagccttgctgacccgcccggaccatgccagcggcaccgagcgcatcgcc
gaggtggccgatgccttgggttggccggatgacgccatcgtggtcaacctgcaaggcgac
gagcctttgatgcggcccgctttgatccgcgaactggcggcggccctggccgggcagacg
gcggcgcgggtcgccaccctggccgcgcccatcggcgaagtggccgaggtgttcgatccc
aacgccgtgaaggtggtgacggacgcccagggttatgcgctgtatttcagccgtgcgccg
attccctggcaccgggcgtcgttcggacaggccggacccggcttgccggaggatttcccc
tggctccggcatatcggcatctatgcctattcggcgggcttcctgcgggactatgtgcgt
tggcccgcttcccgcctggaggcggtggaagccttggagcaattgcggatactgtggcgg
ggtgagcgcatccgggtgttgccggtggacgaagccccggaggcggggatcgataccgaa
gccgattggcggcgggtggaggcggtgttggcgggacggaatccagcgggttag
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