Methylomagnum ishizawai: MishRS11D_16590
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Entry
MishRS11D_16590 CDS
T07434
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03030
DNA replication
misz03430
Mismatch repair
misz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MishRS11D_16590
03430 Mismatch repair
MishRS11D_16590
03440 Homologous recombination
MishRS11D_16590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_16590
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_16590
Enzymes [BR:
misz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MishRS11D_16590
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MishRS11D_16590
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MishRS11D_16590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_5
AAA_18
AAA_14
AAA_assoc_2
nSTAND3
AAA_30
Mg_chelatase
AAA_2
TsaE
AAA_28
AAA_19
Rad17
NACHT
Sigma54_activat
RNA_helicase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BBL74561
LinkDB
All DBs
Position
complement(1825258..1826910)
Genome browser
AA seq
550 aa
AA seq
DB search
MAYQALARKWRPRNFSEIVGQEHVVRALTHALETARLHHAYLFTGTRGVGKTTLARILAK
AINCESRHGSDPCGHCLVCREVDEGRFVDLIEVDAASRTKVEDTRDLLDNVLYAPSQGRY
KVYLIDEVHMLSGHSFNALLKTLEEPPPHIKFLLATTDPQKIPVTVLSRCLQFNLKRLTP
GQIGTQMESILRKEEIQFEANAVKALARAADGSMRDGLSLLDQAIVHGGGRLGEAEVSAM
LGTVSRRPVFDLLDALARSDAAALLALVEALSEHAPNYGDVLQQLLIALHHAALAQWVPE
AVRRDEDAERILALAQRLSAEDLQLFYQTGLVGQRDLPLAPDPRGGFEMVLLRMLAFRPA
EAAAHPPQPSAPRPEPPRLVHPSPTPQARPEPPPAHTQAPAPVAPPPPAPGPAAHSPDGG
VPIPGQVNWRELIRATGVAALARELANNCVLEHLDETSCVLLLHPKQALLRAAHTEANLE
KALQDYFRRPLKLTIKLGEPAGETPALQNQRQKEERQRAAEIEIEQDENVIALKERFDAR
IVPGSVKPLD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcaggctttagcccgcaagtggcgaccccgtaacttcagcgaaatcgtcggc
caagagcatgtcgtcagggccttgacccacgcgctcgaaaccgcccgcctgcaccacgcc
tatctgttcaccggcacccgcggcgtgggcaagaccaccctggcccgcatcctcgccaag
gccatcaattgcgaatcccgccatggctccgacccttgcggccactgcctggtttgtcgg
gaagtggacgagggccgcttcgtcgatctgatcgaggtggacgccgcctcccgcaccaag
gtcgaggacacccgcgacctgctcgacaatgtgctgtacgcgcccagccaaggccgctac
aaggtctacctgatcgacgaagtccacatgctctcggggcatagcttcaacgccctgctg
aagaccctggaagaaccgccgccccatatcaaattcctgctggcgaccaccgacccccag
aaaatcccggtcacggtgctatcgcgctgtttgcagttcaacctcaagcgcctgaccccc
ggccaaatcggcacccagatggaatccatcctgcgcaaggaggaaatccaattcgaggcc
aacgcggtgaaagccctggcccgcgccgccgatggctccatgcgcgatgggctgagcctg
ttggaccaagccatcgtccacggcggcggacgcctgggcgaggccgaggtcagcgccatg
ctgggcacggtgtcgcggcggcccgtgttcgatttgctggacgccctggcccggagcgac
gcggcggcgctgttggccttggtcgaagccctgtcggaacacgcccccaattacggcgac
gtgctgcaacaattgctgatcgccctgcaccatgccgccctggcccaatgggtacccgag
gcggtccgccgcgacgaggacgccgagcgcatcctggccctggcccagcgcctgagcgcc
gaggatttgcagttgttctaccaaaccgggctggtcggccagcgcgacctgcccctcgcg
cccgatccgcgcggcggcttcgagatggtcctgctgcggatgctggccttccgtccggcg
gaggccgcggcccacccgccccagccttccgcgccacgcccggaaccaccgcggctggtc
catccgtccccgacaccccaggcccggcccgaaccgcccccggcccatacccaggcaccc
gccccggtcgcgccgccacctccggcccccggcccggcggcgcactccccggacggcggc
gtccccatccccggacaggtcaattggcgcgagttgatccgcgccaccggcgtcgccgcc
ctggcccgcgaactggccaacaactgcgtgctggaacatctggacgaaacctcctgcgtc
ctgctgctgcatcccaagcaagccctgctccgcgccgcccataccgaggccaacctggaa
aaagccctgcaagactatttccgccgtccgctcaagctcaccatcaagctcggcgaaccc
gcgggcgaaacccccgccctgcaaaaccagcggcaaaaggaagaacgccaacgggcggcg
gagatcgaaatagaacaagacgaaaacgtcatcgccttgaaggaacggttcgatgcccgc
atcgtgcccggttccgtcaaacccctggattga
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