Methylomagnum ishizawai: MishRS11D_17570
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Entry
MishRS11D_17570 CDS
T07434
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03030
DNA replication
misz03430
Mismatch repair
misz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MishRS11D_17570 (holB)
03430 Mismatch repair
MishRS11D_17570 (holB)
03440 Homologous recombination
MishRS11D_17570 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_17570 (holB)
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_17570 (holB)
Enzymes [BR:
misz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MishRS11D_17570 (holB)
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MishRS11D_17570 (holB)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MishRS11D_17570 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA_16
AAA
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBL74659
LinkDB
All DBs
Position
1928938..1929942
Genome browser
AA seq
334 aa
AA seq
DB search
MPTEIELYPWLADAWHTLGAHLSAGRVPQALLIQGAAGIGKTHLAGLFAQRLLCSAPGEF
ACGRCPACRLFLAGSHPDFLKVQPAEPGKGIGVDAIRHLIADLALKSQFESYRVVVIAPA
QAMNGSAANALLKTLEEPAERTVMLLLSEAPAGLPATILSRCQRLPVAPPDTATACQWLE
ARHPGCDVATLLAAAQGSPLRALALVGSEVAERRRTVFRQWGGVLLGQEEPVAVAELWEK
QAHEEFVEWISTWTMDLIRLLSAPAAPPRYNPDLAKGMRTLAGRLNLRDLFEYWNLVLRS
KRALGGQANRQLLLEELLIHGSRLGRPASPPRLG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgaaatcgaactttacccctggctggccgatgcttggcacaccctgggggcg
cacctgtccgctggacgggtgccgcaagccttgctgatccagggcgcggcggggatcggc
aaaacccatctggccggattgttcgcccagcgcctattgtgttccgcccccggcgaattc
gcttgtggccggtgtcccgcctgccgcttgttcctggccggtagccatcccgatttcctc
aaggtccagcccgccgagccgggcaagggcatcggcgtcgatgccatccgccatctgatc
gccgacctcgccctcaaatcccagttcgaaagctaccgggtggtcgtcatcgccccggcc
caggccatgaacggcagcgccgccaacgccttgctcaagaccttggaggaacccgccgag
cgcaccgtcatgctgttgctgagcgaagcaccggccggcctgcccgccaccatcctcagc
cgctgtcaacgcttgccggtggcgccgccggacacggccaccgcctgccaatggctggaa
gcccgccatcccggctgcgacgtggccaccctgttggcggcggcgcagggttcgcccttg
cgggccttggccctggtcggttcggaggtggcggagcggcggcgcacggtgttccgccaa
tggggcggggtgctgctgggccaggaagagccggtggcggtggcggaactctgggagaaa
caggcccacgaggaatttgtcgaatggatttcgacctggaccatggatttgatccggctg
ctgagcgcccccgccgccccgccccgctataaccccgatctcgccaagggtatgcggacc
ttggctgggcggctaaacttgcgggacttgttcgagtattggaaccttgtcctgcgttcc
aagcgggccttgggcggccaggccaaccggcaattgctgttggaggaattgctgatccat
gggtcgcgcctgggccgtcccgcgagtccaccacgcttgggttaa
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