Methylomagnum ishizawai: MishRS11D_18310
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Entry
MishRS11D_18310 CDS
T07434
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MishRS11D_18310 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
misz03019
]
MishRS11D_18310 (groL_1)
03110 Chaperones and folding catalysts [BR:
misz03110
]
MishRS11D_18310 (groL_1)
03029 Mitochondrial biogenesis [BR:
misz03029
]
MishRS11D_18310 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
misz04147
]
MishRS11D_18310 (groL_1)
Enzymes [BR:
misz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
MishRS11D_18310 (groL_1)
Messenger RNA biogenesis [BR:
misz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
MishRS11D_18310 (groL_1)
Chaperones and folding catalysts [BR:
misz03110
]
Heat shock proteins
HSP60 / Chaperonin
MishRS11D_18310 (groL_1)
Mitochondrial biogenesis [BR:
misz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
MishRS11D_18310 (groL_1)
Exosome [BR:
misz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MishRS11D_18310 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
MishRS11D_18310 (groL_1)
Exosomal proteins of breast cancer cells
MishRS11D_18310 (groL_1)
Exosomal proteins of colorectal cancer cells
MishRS11D_18310 (groL_1)
Exosomal proteins of bladder cancer cells
MishRS11D_18310 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBL74733
LinkDB
All DBs
Position
complement(2024334..2025959)
Genome browser
AA seq
541 aa
AA seq
DB search
MAAKDVRFSDDARQRMLVGVNVLADAVKQTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASRTSDVAGDGTTTATVLAQAIVREGLKSVTAGSNPMDIKRGI
DLGVAVVVKQLQALSKPCTTSKEIAQVGSISANSDESIGQIIADAMDKVGKEGVITVEDG
SGLDNTLDVVEGMQFDRGYLSPYFINSQETMSVELDSPFILLHDKKISNIRDLLPVLEKV
AKSGKSLLIVAEDVEGEALATLVVNTMRGIIKVCAVKAPGFGDRRKAMLEDIAILSGGTV
ISEDVGLSLEKVELSDLGQAKKVQVNKENTTIVDGAGSAATIKARVEQIRKQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVAFV
RAQAALKDLQGKNHDQTVGVAILRRAIEEPLRQIVTNAGEEASVVLSKVQEGSGSFGYNA
GNGEYGDMIEMGILDPTKVTRSALQNASSVAGLMLTTEAMVAEIPKKESAPAMPGGMDGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagatgtacgcttttccgacgacgcccgccaacgcatgctggtcggcgtg
aacgtcctcgccgatgccgtcaagcagaccctcggccccaaaggccgcaacgtggtgctg
gaaaagagcttcggcgctcccaccgtgaccaaggacggcgtgtccgtcgccaaggaaatc
gaactcaaggacaagttcgaaaacatgggagcccagatggtgaaggaagttgcctcccgc
acttccgacgtggccggcgacggcaccaccaccgccaccgtgctggcccaggccatcgtg
cgcgaaggtctgaaatccgtcaccgccgggtccaacccgatggacatcaaacgcggcatc
gacctcggcgtcgcggtcgtggtcaagcaactgcaagccctgtccaagccctgcaccacc
agcaaggaaatcgcccaggtcggttccatctcggccaactccgacgagagcatcggccag
atcatcgccgacgccatggacaaggtcggcaaggaaggcgtcatcaccgtggaggacggt
tccggcctcgacaacaccctggacgtggtcgagggcatgcagttcgaccgcggctacctc
tccccctatttcatcaacagccaggaaaccatgagcgtggaactcgactccccgttcatc
ctgctgcacgacaagaaaatctccaacatccgcgacctgctgccggtgctggaaaaagtc
gccaagtccggcaagtccctgctgatcgtggccgaggacgtggaaggcgaagcgctggcc
accctggtggtcaacaccatgcgcggcatcatcaaggtctgcgcggtcaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgagcggcggcaccgtg
atttccgaggatgtcggcctgtcgctggagaaggtcgagttgtccgacctgggccaggcc
aagaaggtgcaggtcaacaaggaaaacaccaccatcgtcgatggggccggtagcgccgcc
accatcaaggcccgcgtcgagcagatccgcaagcagatcgaggacaccagttccgactac
gaccgcgagaagctgcaagagcgcgtcgccaagctggccggcggcgtggcggtcatcaag
gtgggtgccgcgaccgaagtcgagatgaaggaaaagaaggcccgcgtggaagacgcgctg
cacgcgacccgcgccgcggtcgaagaaggcatcgtgcccggcggcggcgtggccttcgtc
cgcgcccaggccgcgctgaaggacttgcagggcaagaaccacgaccagaccgtgggcgtc
gccatcctgcgccgcgccatcgaggaaccgctgcgccagatcgtcaccaacgccggcgaa
gaggcttccgtggtgctgtccaaggtgcaggaaggcagcggcagcttcggctacaacgcg
ggcaacggcgaatacggcgacatgatcgaaatgggcatcctggacccgaccaaggtgacc
cgttccgcgctacagaacgcctcctccgtggccggcctgatgctgaccaccgaggccatg
gtcgccgaaatccccaagaaggaatcggccccggcgatgcccggcggcatggacggcatg
atgtga
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