Methylomagnum ishizawai: MishRS11D_22890
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Entry
MishRS11D_22890 CDS
T07434
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_22890 (radA)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MishRS11D_22890 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA_16
GvpD_P-loop
Lon_C
DnaB_C
AAA_22
AAA_24
AAA_5
AAA
nSTAND_NTPase5
Rad51
DUF7130
AAA_14
nSTAND3
DUF7129
Zn_ribbon_8
NTPase_1
SLFN-g3_helicase
ATPase_2
CobU
AAA_29
Motif
Other DBs
NCBI-ProteinID:
BBL75191
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All DBs
Position
2539966..2541345
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AA seq
459 aa
AA seq
DB search
MAVKPPKDGRKIVYRCTDCGHAQNKWAGQCPGCGAWNSLVEGVEDRAARFAGFAGAAGEG
AAPVSLAEVEAEEIRRVPCGLEEFDRVLGGGLVPGSAILIGGDPGIGKSTLLLQTVAALG
GDHKVLYVTGEESIRQVSLRARRLQLGGAAAVRIVAETRLEQILAVAQAEQPEFLVVDSI
QTAYSELLQSAPGSVAQVRECAARLVRYAKETQTTVFLVGHVTKEGALAGPRVLEHMVDT
VLYFEGDDSSRFRVIRAFKNRFGAVNEMGVFAMTETGLREVRNPSAIFLSRGDEDAPGSV
VMVMREGSRPMLVEVQALVDESHLPSPRRVAVGMEGNRLAMLLAILHRHGGVPLFNQDVF
VNLVGGLRLGETAGDLAVALAVVSSYRDKQVPRDWVVFGELGLNGEVRPVQNGEERLKEA
AKHGFKHALAPAKNAPRSLAVPGLEVVPVKSLREAIAVL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttggccgtgaaaccgcccaaggacggccgcaaaatcgtctaccgctgcaccgattgcggc
catgcccagaataaatgggccggccaatgtcccggctgcggcgcttggaactccctggtc
gaaggcgtcgaggaccgcgccgcgaggttcgccggtttcgccggggcggcgggggagggg
gccgcgccggtgtccctggccgaggtcgaggccgaggaaatccgccgcgtgccctgtggc
ctggaagaattcgaccgggtcttgggtggcgggctggtgccggggtcggccatcctgatc
ggcggcgatcccggcatcggcaaatccaccttgctgttgcagaccgtggccgcgctgggt
ggcgaccacaaggtgctttacgtcaccggcgaggaatccatccgtcaggtgagcctcagg
gcgcggcggctgcaactcggcggcgcggcggcggtgcggatcgtcgccgaaacccgccta
gagcaaatcttggcggtggcgcaggcggaacagccggaattcctggtggtggattccatc
cagaccgcctacagcgaattgctgcaatccgcccccggttcggtggcccaggtgcgggag
tgcgccgcccggctggtgcgctacgccaaggaaacccagaccacggtgttcctggtcggc
catgtgaccaaggagggcgcgctggccggtcccagggtgttggaacatatggtcgatacc
gtgctgtatttcgagggcgacgacagcagccggttccgggtgatccgcgccttcaagaac
cgtttcggcgcggtcaacgaaatgggcgtgttcgccatgaccgaaaccggcctgcgcgag
gtccgcaatccctcggccatcttcctgtcccgtggcgacgaggacgcgcccggcagcgtg
gtgatggtgatgcgcgagggcagccgcccgatgctggtcgaggtccaggccttggtggac
gaatcccatctgcccagcccgcgccgggtcgcggtgggcatggagggcaaccggctggcg
atgctgctggcgatcctgcatcgccatggcggggtgccgctgttcaaccaggatgtgttc
gtcaatctggtgggcggcctgcgcctgggcgagaccgccggggatttggcagtggctttg
gcggtggtgtcgagctaccgcgataagcaggtgccgcgcgattgggtggtgttcggcgaa
ctcggcctgaatggcgaggtccgcccggtgcagaacggcgaggaacgcctgaaggaagcc
gccaaacatgggttcaagcacgccctggccccggccaagaacgcgcccaggtcgctggcc
gttcccggcttggaggtcgttcccgtgaagagcctccgcgaagctattgccgtattatga
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