Methylomagnum ishizawai: MishRS11D_23160
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Entry
MishRS11D_23160 CDS
T07434
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00300
Lysine biosynthesis
misz00470
D-Amino acid metabolism
misz01100
Metabolic pathways
misz01110
Biosynthesis of secondary metabolites
misz01120
Microbial metabolism in diverse environments
misz01230
Biosynthesis of amino acids
Module
misz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MishRS11D_23160
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MishRS11D_23160
Enzymes [BR:
misz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MishRS11D_23160
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBL75218
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All DBs
Position
complement(2573765..2575060)
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AA seq
431 aa
AA seq
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MAEAFAWHTRIDAAEAGQALAAAMAQGVAGDRPALLFHSLDALAARIDLLSTSFPPGTLH
ALAIKANPVVGVLRFAVARGMGLEAASWEEVALAQAAGCPPERILFDSPAKTRDELATAL
DAGVTVNADNFDELARIDTLLDGDPQPTSLIGLRVNPQTGLGSIGMLSVSGGYSKFGVPL
GEQRAAIVAAFRRYPWLRGLHVHTGSQGIGMARMVRAAELVFALRETIHRDLGERRIVSV
DIGGGLPWPYRADGTAPTPAAYAAALGRAVPEAFAEGVRLATEFGRILQAGSGFAASRVE
YLKTDAGRRTAVVHFGADLFMRKVYRPEDWHHHISVLAPDGRPKQAPGEPHVIAGPLCFG
GDILAEEAVLPRVEAGDWIVLHDAGGYTLGLWSRHCNRGLPRVLGYRADPWRFQVLLAGE
EPADVVRFWGG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctttcgcttggcatacccgcatcgacgcggcggaggcgggccaagcgctc
gccgccgccatggcccaaggcgtcgcgggcgaccggcccgccttgctgttccacagcctg
gacgccctggcggcgcggatcgacctgttaagcaccagcttcccgccgggcaccctgcac
gccctcgccatcaaggccaatccggtggtcggggtgctgcgcttcgcggtggcgcggggc
atgggcctggaagccgcctcctgggaggaagtggccctggcccaggcggcgggctgcccg
ccggaacgcatcctgttcgattcgcccgccaaaacccgcgacgaactcgccacggccctg
gacgccggcgtcacggtcaacgccgataatttcgacgagttggcccgcatcgatacgctg
ctggacggcgatccccagccaaccagcctgatcggcctgcgcgtcaatccccaaaccggc
ctgggcagtattgggatgctcagcgtctcgggcggttattccaagttcggcgtgcctttg
ggggagcaacgcgccgccatcgtcgcggcgttccggcgctatccctggctacggggtttg
catgtccacaccggcagccagggcatcggcatggcgcggatggtccgggcggcggaactg
gtgttcgccttgcgggaaacgatccatcgggatttgggcgagcgccgcatcgtctcggtg
gacatcggtggcggcctgccctggccttaccgggcggatggaaccgcgcccaccccggcg
gcctatgccgccgcgctgggccgggccgtcccggaggcgttcgcggaaggggtccgcttg
gcgaccgaatttggccggatcctgcaagccgggagcggtttcgcggccagccgggtggaa
tacctcaagaccgatgcagggcggcggaccgccgtcgtccatttcggggccgatttgttc
atgcggaaggtctaccgcccggaggattggcatcatcatatttcggtgctggccccggat
ggccgcccaaagcaagcccccggcgaaccccatgtcatcgccggacccttgtgcttcggc
ggcgatattttggcggaagaggccgttttgcccagggtggaggcgggcgactggatcgtg
ctgcacgacgccgggggctatacgctgggcctgtggtcgcggcattgcaaccggggtttg
ccgagggtcttgggctaccgggccgacccgtggcggttccaggtattgctggcaggggag
gagccggcggatgtggtccggttctggggggggtaa
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