Methylomagnum ishizawai: MishRS11D_23620
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Entry
MishRS11D_23620 CDS
T07434
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_23620 (sbcD)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MishRS11D_23620 (sbcD)
Archaeal homologous recombinant proteins
MishRS11D_23620 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BBL75264
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Position
2631079..2632326
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AA seq
415 aa
AA seq
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MRLLHTSDWHLGQTFHDYDREEEHKLFLDWLLDRLEAERADALLVAGDIFDNANPSAKSQ
EQLYRFVSAAKRLCPRLDIVLIAGNHDSPARLEAPSPLLDAFGVRVVGPARDPAGGFDPE
RLVVPLTRADGTVGAWCLAVPFLRPADLAASEDNDVLELAEDDYVRGVKRLYRRVLDAAL
VRRQAGQALIALGHCHIAGGAVSEDSERRIVVGGADSLPRGIFAAELAYVALGHLHRAQT
IGGEGRLRYSGSPLPLSFSEIDYPHQILRVDLDGERVAAVEAIPVPRFVPLLRVPEQHAP
VTEVLDILAGLDLPEVPLRPYLEVRVRLDLPEPGLAARIEAALDGKHVRLARIDRRHGPA
AGGEDPAQPLEELGDFRPGTVFQNLYARHYHGETPPELRQAFDTLLSLCQLEEGA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacctccgactggcacctcggccagaccttccacgactacgaccgc
gaggaggagcacaagctgttcctggactggctgctggaccggctggaagcggaacgggcc
gacgccctgctggtggcgggcgatatcttcgacaacgccaacccttccgccaaatcccag
gaacagctctaccgtttcgtcagcgcggccaagcggctttgcccccgactcgatatcgtg
ctgatcgcgggcaaccacgattccccggcccggctggaagcgccctcgcccctgctcgac
gccttcggcgtgcgggtggtgggaccggcccgcgaccctgcgggcgggttcgacccggaa
cggttggtggtgcccctgacccgcgccgacggcacggtcggcgcgtggtgcctcgccgtg
cccttcctgcgccccgccgacctggccgcctccgaggacaacgatgtgctggaactggcc
gaggacgattacgtgcgcggggtcaaacggctctaccgccgggtcttggatgccgccctg
gtccggcggcaagcggggcaagccctgatcgccctgggccattgccatatcgcgggcggc
gcggtgtcggaagattccgagcggcgcatcgtggtcggcggggccgattcattgccccgt
ggcatcttcgccgccgaactggcctatgtggcgctgggccacctacaccgcgcccaaacc
atcggcggggagggacgcctgcgctattcgggcagtcccctgccgctctccttcagcgag
atcgattatccgcaccaaatcctgcgggtcgatctggacggcgagcgggtcgccgccgtc
gaagccatcccggtgccgcgcttcgtgccgctgctgcgcgtgcccgagcaacacgcgccc
gtgaccgaagtgctggatatcctggccgggctggacctcccggaggtgccgctacggccc
tatctcgaagtccgggtgcggctcgacctgccggaacccggcctcgcggcgcggatcgaa
gccgccctcgacggcaagcacgtccgcctcgcccgcatcgaccgccgccacggccccgcg
gcgggcggcgaagaccccgcccagcccttggaggaactcggcgacttccggcccggcacc
gtgttccagaacctctacgcccgccattaccacggcgaaaccccgcccgaattgcggcaa
gccttcgacactttgttgagcctgtgccaactggaggaaggcgcatga
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