Methylomagnum ishizawai: MishRS11D_28050
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Entry
MishRS11D_28050 CDS
T07434
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00300
Lysine biosynthesis
misz00470
D-Amino acid metabolism
misz01100
Metabolic pathways
misz01110
Biosynthesis of secondary metabolites
misz01120
Microbial metabolism in diverse environments
misz01230
Biosynthesis of amino acids
Module
misz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MishRS11D_28050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MishRS11D_28050 (dapF)
Enzymes [BR:
misz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MishRS11D_28050 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
BBL75707
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Position
3105520..3106344
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AA seq
274 aa
AA seq
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MKFTKMQGLGNDFVVIDAVRQAVDLSPARMRFLADRHFGIGCDQILVVEPAQSPDADFRY
RIFNADGGEVAQCGNGARCFARFVLDQGLCDKDEIRVDTQAGRLILRPRPDGSVTVDMGV
PRHAPAQIPLRAETEALAYPVEIDGTVWEFGAVSMGNPHAVLRVESVDSAPVAALGPRLE
SHPLFPERANIGFMEIVERSHIRLRVFERGSGETLACGSGACGAVVVGMERAWLDSPVRV
DLPGGALDIAWAGRGSPVLMSGPAVAVFEGEIPA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccaaaatgcagggcttgggcaacgacttcgtggtgatcgacgccgtgcgc
caagccgtggacctctcgcccgcacggatgcgcttcctggccgaccgccatttcggcatc
ggctgcgaccaaatcctcgtcgtcgaacctgcccaaagccccgacgccgatttccgctac
cgcatcttcaacgccgatggcggcgaagtcgcccaatgcggcaacggggcgcggtgtttc
gcccgcttcgtgctggaccagggcctgtgcgataaggacgaaatccgggtcgatacccag
gcgggccgcttgatcctgcgtccgcgcccggacggctcggtcacggtggacatgggcgta
ccgcgccacgccccggcccaaatccccttgcgggcggaaaccgaagccttggcctatccg
gtcgagatcgacggcacggtttgggaattcggcgcggtgtcgatgggcaatccccatgcc
gtgctgcgggtggagagcgtggacagcgccccggtcgcggccttgggtccgcgcctggaa
agccatcccctgttcccggaacgggccaatatcggcttcatggaaatcgtggagcggagc
cacatccgcctgcgggtgttcgagcgcggttcgggggaaaccctggcttgcggcagcggc
gcctgcggagccgtggtggtgggaatggagcgcgcttggctggacagcccggtgcgggtc
gatcttcccggcggggcgttggacatcgcctgggcgggccggggttcgccggtgctgatg
agcggcccggcggtcgccgtattcgagggggaaatccccgcatga
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