KEGG   Methylomagnum ishizawai: MishRS11D_28050
Entry
MishRS11D_28050   CDS       T07434                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
misz  Methylomagnum ishizawai
Pathway
misz00300  Lysine biosynthesis
misz00470  D-Amino acid metabolism
misz01100  Metabolic pathways
misz01110  Biosynthesis of secondary metabolites
misz01120  Microbial metabolism in diverse environments
misz01230  Biosynthesis of amino acids
Module
misz_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:misz00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MishRS11D_28050 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MishRS11D_28050 (dapF)
Enzymes [BR:misz01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     MishRS11D_28050 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase
Other DBs
NCBI-ProteinID: BBL75707
LinkDB
Position
3105520..3106344
AA seq 274 aa
MKFTKMQGLGNDFVVIDAVRQAVDLSPARMRFLADRHFGIGCDQILVVEPAQSPDADFRY
RIFNADGGEVAQCGNGARCFARFVLDQGLCDKDEIRVDTQAGRLILRPRPDGSVTVDMGV
PRHAPAQIPLRAETEALAYPVEIDGTVWEFGAVSMGNPHAVLRVESVDSAPVAALGPRLE
SHPLFPERANIGFMEIVERSHIRLRVFERGSGETLACGSGACGAVVVGMERAWLDSPVRV
DLPGGALDIAWAGRGSPVLMSGPAVAVFEGEIPA
NT seq 825 nt   +upstreamnt  +downstreamnt
atgaaattcaccaaaatgcagggcttgggcaacgacttcgtggtgatcgacgccgtgcgc
caagccgtggacctctcgcccgcacggatgcgcttcctggccgaccgccatttcggcatc
ggctgcgaccaaatcctcgtcgtcgaacctgcccaaagccccgacgccgatttccgctac
cgcatcttcaacgccgatggcggcgaagtcgcccaatgcggcaacggggcgcggtgtttc
gcccgcttcgtgctggaccagggcctgtgcgataaggacgaaatccgggtcgatacccag
gcgggccgcttgatcctgcgtccgcgcccggacggctcggtcacggtggacatgggcgta
ccgcgccacgccccggcccaaatccccttgcgggcggaaaccgaagccttggcctatccg
gtcgagatcgacggcacggtttgggaattcggcgcggtgtcgatgggcaatccccatgcc
gtgctgcgggtggagagcgtggacagcgccccggtcgcggccttgggtccgcgcctggaa
agccatcccctgttcccggaacgggccaatatcggcttcatggaaatcgtggagcggagc
cacatccgcctgcgggtgttcgagcgcggttcgggggaaaccctggcttgcggcagcggc
gcctgcggagccgtggtggtgggaatggagcgcgcttggctggacagcccggtgcgggtc
gatcttcccggcggggcgttggacatcgcctgggcgggccggggttcgccggtgctgatg
agcggcccggcggtcgccgtattcgagggggaaatccccgcatga

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