Methylomagnum ishizawai: MishRS11D_29360
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Entry
MishRS11D_29360 CDS
T07434
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_29360 (phr)
Enzymes [BR:
misz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
MishRS11D_29360 (phr)
DNA repair and recombination proteins [BR:
misz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
MishRS11D_29360 (phr)
Prokaryotic type
MishRS11D_29360 (phr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBL75838
LinkDB
All DBs
Position
complement(3256553..3257992)
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AA seq
479 aa
AA seq
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MKTAMVWFRQDLRLADNPALRAALAAAERVVPVYIHAPVSGGTWPMGSASRWWLHHSLMA
LDADLRRLGSRLVLRRGASFQVLAGLLAETGATAVYWNRCYEPSAIARDAEIKRVLRNEG
YFTVESHNSGLLYEPWELLREGGQPYRVFTPFWKAMQKRGLDFPPEPAPADLPPVADELW
SLAVGDLGLLPRIPWDAGFREGWQPGEDGAARRLAGFIDSALAGYHERRDRPDLPDTSRL
SPYLHFGEVGPRQIVHAVRRALPPEAEAGAEAYVRELAWREFAHHLLYHFPDTTDAPLDA
KFEAFPWATDDQEALTAWQRGQTGYPLVDAGMRELWRTGWMHNRVRMVVASLLTKNLLIP
WRKGARWFWDTLVDADLANNTLGWQWTAGCGADAAPYFRVFNPVLQGQRFDPDGAYVRRW
VPELAGLPDAAIHRPWEAAPAVLREAGVRLGETYPLPIVDLKSSRERALAAFARLKAAG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccgcgatggtttggttccgccaagacctgcgcctcgccgacaaccccgcgctg
cgggccgcgctcgccgccgccgagcgggtggtgccggtctatatccacgccccggtcagc
ggcgggacttggcccatggggtcggcgtcccgttggtggctgcatcatagcctcatggcg
ctcgatgccgatttgcgccgcctgggctcgcggttggtgctgcggcgcggggcgagtttc
caggtgctggccgggctgttggccgagaccggcgcgaccgccgtttattggaaccgctgc
tacgaaccttccgccatcgcccgcgacgccgaaatcaagcgggtgttgcgcaacgagggc
tatttcacggtcgagagccataacagcggcctgttgtacgagccttgggaactgctgcgc
gagggcggccagccctaccgggtgttcacgccgttctggaaggcgatgcagaaacgcggg
ctggattttccgcccgaacccgcgccggcagacttgccaccggtggccgatgaactgtgg
agcttggccgtcggggatttgggtttgttgccccggattccgtgggatgccggtttccgc
gaaggctggcagccgggggaagacggcgcggcgcggcgcttggccggattcatcgattcc
gccctggcgggctatcacgaacggcgcgaccggcccgatttgcccgatacctcgcgtttg
tcgccctatctccatttcggcgaggtcggcccgcgccagatcgtccacgccgtgcggcgg
gcgctgccgcccgaggccgaggctggggccgaagcctatgtccgcgaactggcgtggcgg
gagttcgcccatcatctgctctaccacttccccgataccaccgatgcgcccttggacgcc
aagttcgaggcgttcccctgggccaccgatgaccaggaggcgctcacggcttggcagcgc
ggccagaccggctatcccctggtcgatgccgggatgcgcgagttgtggcgcaccggctgg
atgcacaaccgggtgcggatggtggtggcgtcgctgttgaccaagaacctgctgattccc
tggcggaagggtgcgcgttggttctgggatactttggtggatgccgatttggccaacaat
accctgggctggcaatggaccgccggttgcggggccgacgccgcgccgtatttccgggtg
ttcaatccggtgttgcaagggcagcgcttcgaccccgacggggcttatgtgcggcgctgg
gtgccggaactggcgggcttgccggacgcggcgatccaccggccttgggaggccgcgccc
gccgtgttgcgggaagcgggcgtgcggctcggggaaacctatcccctgcccatcgtggat
ttgaagtccagccgggagcgggccttggcggcgtttgcgcggctcaaggcggcgggatag
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