Methylomagnum ishizawai: MishRS11D_29480
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Entry
MishRS11D_29480 CDS
T07434
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03030
DNA replication
misz03410
Base excision repair
misz03420
Nucleotide excision repair
misz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MishRS11D_29480 (polA)
03410 Base excision repair
MishRS11D_29480 (polA)
03420 Nucleotide excision repair
MishRS11D_29480 (polA)
03440 Homologous recombination
MishRS11D_29480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
misz03032
]
MishRS11D_29480 (polA)
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_29480 (polA)
Enzymes [BR:
misz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MishRS11D_29480 (polA)
DNA replication proteins [BR:
misz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MishRS11D_29480 (polA)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MishRS11D_29480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MishRS11D_29480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBL75850
LinkDB
All DBs
Position
complement(3269400..3272123)
Genome browser
AA seq
907 aa
AA seq
DB search
MSATTPKTLVLVDGSSFLYRAFHALPPLTNSKGQPTGAVLGVANMLRKLVATHATRHIGV
VFDAPGKTFRDELFEHYKAHRPPMPDELRAQVEPLRAIIRAMGLPLLVETGVEADDVIGT
LATQAAALGYRVVISTGDKDMAQLVCDRVTLENTMFDKALDRAGVIEKFGVPPECIVDYL
ALVGDSADNIPGVDKVGPKTAAKWLRQYGSLDALIENATAISGKVGENLRAALDKIPLSR
QLATLRCDVPLDLGPDDLVCAEPDRAVLRGLLVQLEFNAWLKQLDAGGDAPPPQAKPQAA
RSEARYETVLTEADLETWLDRLQQAELFAFDTETTSLDYMRAEIVGLSFAVEPGHAAYVP
LAHNYPGAPDQLDRAAVLARFKPLLEDPGRAKLGQNLKYDANVLVNHGIALKGIRHDTML
QSYVLDSTASRHDMDSLALHYLQYHTIGYEDVAGKGAKQIPFEQVGIEEAARYAAEDADI
TLRLHRHLWPLVQAKDRLRGLYESVEIPLVPVLSRIERTGVLVDVFKLGEQSRELERRMA
EIEREAHAAAGQPFNLGSPKQIQAILYDKQNLPVLKKTPKGQPSTDESVLAELADDGYEL
PRLILDHRSVAKLKSTYTDKLPQMIDPGTGRVHTSYHQAVAATGRLSSSDPNLQNIPVRT
EEGRRIRQAFVAPDGYRIVAADYSQIELRIMAHFSGDPNLCAAFADNADVHRHTAAEVFG
VAPDQVTQDQRRSAKAINFGLIYGMSAFGLAQQLGIERGLAQAYIDAYFRRYPGVKAFMD
QTRESAKANGYVETLFGRRLYIPEIDSRNAQRRQYAERTAINAPMQGTAADIIKRAMIAV
DGWIQGQSEPGAVKMIMQVHDELVFEAREDGVARASAEIRALMCAAAELAVPLLVEVGVG
GNWDEAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaccacccccaaaaccctggtcctggtcgatggctcctccttcctgtaccgc
gccttccacgccctgccgcccctgaccaattccaagggccagcccaccggcgcggtgctg
ggcgtcgccaatatgctcaggaaactggtcgccacccacgccacccgccatatcggcgtg
gtgttcgacgcgccggggaagaccttccgcgacgagttgttcgagcattacaaggcccac
cgcccgccgatgccggacgaactccgcgcccaggtcgaacccttgcgggccatcatccgg
gccatgggattgccgctgttggtggaaaccggggtggaggccgacgatgtgatcggcacg
ctggcgacccaggccgccgcgctgggttatcgggtggtgatttcgaccggcgacaaggac
atggcgcaattggtctgcgaccgggtgacactggaaaacaccatgttcgacaaggccctg
gaccgcgcgggtgtgatcgagaagttcggggtgccgccggaatgcatcgtcgattatctg
gccctggtcggcgacagcgcggacaacatccccggcgtggacaaggttgggccgaaaacc
gccgccaagtggttgcggcaatatggctcgctcgatgccctgatcgagaacgccacagcc
atttccggcaaggtcggcgagaacctccgggccgcgctggataagattccgctctcgcgc
caactcgccaccctccgctgcgatgtgccgctggacctggggccggatgatttggtctgc
gccgaacccgaccgcgccgtcctgcgcggattgctggtgcaattggaattcaatgcctgg
ctcaagcaactggacgcgggcggcgacgccccgccgccgcaagccaagccacaagccgcc
cggagcgaagcccgctatgaaacggtactgaccgaggccgacctggagacgtggctggac
cgtttgcagcaagccgaactgttcgccttcgacaccgaaaccaccagcctcgattacatg
cgggccgagatcgtcgggctatcgttcgcggtggaaccgggccacgcggcctatgtgccc
ctggcccacaactatcccggcgctcccgaccaactcgaccgcgccgccgtgctggcacgg
ttcaagcccctgctggaagaccccggtcgcgccaagctgggccagaacctcaaatacgac
gccaatgtgctggtcaaccatggcatcgccctcaaaggcatccgccacgacaccatgttg
caatcctatgtgctggacagcaccgccagccgccacgatatggattccctggccttgcat
tatctccagtaccacaccatcggctacgaggacgtggccggcaaaggagccaagcaaatc
ccgttcgagcaggtcggcatcgaggaagccgcgcgctacgccgccgaggacgccgatatc
accttgcgcctgcatcgacatttgtggcccctggtccaagccaaggaccgcctgcgcggc
ctgtatgaaagcgtggaaatcccgctggtgccggtgttgtcgcggatcgagcggaccggg
gtcttggtggatgtgttcaagctgggcgaacaaagccgcgagttggaacggcgcatggcc
gagatcgaacgggaagcccatgccgccgccggccagccgttcaacctgggttcgcccaag
caaatccaggccatcctctacgataagcagaatctgccggtcctcaagaaaacccccaaa
ggccagccctcgaccgatgaatcggtgctggccgaactggccgacgacggttatgaactg
ccacgcttgatcctcgaccaccgctcggtcgccaagctgaaatccacctacaccgacaag
ctgccgcagatgatcgaccctggcacgggccgggtgcatacctcgtatcaccaagccgtg
gcggcgaccgggcggttgtcgtcgtccgaccccaatttgcagaacatcccggtccgcacc
gaggaaggccgccgtatccgccaggctttcgtggccccggacggttaccgcatcgtggcg
gcggattattcccagatcgagctacggatcatggcccatttttcgggcgacccgaacctc
tgcgccgccttcgccgacaacgccgatgtccaccgccacaccgccgccgaggtgttcggc
gtggcccccgaccaagtgacccaggaccagcgccgttcggccaaggccatcaatttcggc
ttgatctatggcatgtcggctttcggcctcgcccagcaattgggcatcgagcggggtttg
gcccaggcctatatcgacgcctatttccggcgctatcccggcgtcaaagccttcatggac
cagacccgcgaatccgccaaggccaacggctacgtggaaaccctgttcgggcgcaggctc
tatatcccggagatcgattcccgcaacgcccagcgccgccaatatgccgagcgcaccgcc
atcaacgcgcccatgcagggtacggcggcggacatcatcaagcgggcgatgatcgcggtg
gatggctggatccaaggccagtccgaacccggcgcggtcaagatgatcatgcaggtccac
gacgaactggtgttcgaggcgcgggaagacggggtggcgcgggcttccgccgaaatccgg
gccttgatgtgcgcggcggcggagttggcggtgccgttattggtggaggtgggcgtgggc
gggaattgggacgaggcgcattga
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