Methylomagnum ishizawai: MishRS11D_29560
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Entry
MishRS11D_29560 CDS
T07434
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MishRS11D_29560 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
misz01007
]
MishRS11D_29560 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
misz03016
]
MishRS11D_29560 (aspS)
03029 Mitochondrial biogenesis [BR:
misz03029
]
MishRS11D_29560 (aspS)
Enzymes [BR:
misz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
MishRS11D_29560 (aspS)
Amino acid related enzymes [BR:
misz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MishRS11D_29560 (aspS)
Transfer RNA biogenesis [BR:
misz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MishRS11D_29560 (aspS)
Prokaryotic type
Other AARSs
MishRS11D_29560 (aspS)
Mitochondrial biogenesis [BR:
misz03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MishRS11D_29560 (aspS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
CFAP90
Motif
Other DBs
NCBI-ProteinID:
BBL75858
LinkDB
All DBs
Position
3278896..3280689
Genome browser
AA seq
597 aa
AA seq
DB search
MRSHRCGELTESHLDQEVDLCGWTHRRRDHGGVIFIDLRDREGLVQVVFDPDYADAFKLA
ESVRSEYVLKVHGKVRRRPQGTENPNLGTGKVEVLATELEILNKAETPPFPLESEVEVSE
ETRLRYRYIDLRRPAMQQKLRMRRDITRSLRGFMDANGFWEIETPFLTKATPEGARDYLV
PSRTHQNHFFALPQSPQLYKQLLMVSGLDRYYQVVRCFRDEDLRADRQPEFTQLDIETSF
MDQDAITDLMEEMIRALFKEVLDVELPNPFPRMTYAEAMRDYGSDKPDLRVPFKLVDVAD
LLTTCEFKVFAGAAKDPEGRVAALRLPKGAELSRKELDDLAAFVAIYGAKGLAYIKVTDR
AAGIEGLQSPIVKFLPPEAVLAILDRVGAETGDVVFFGADKAKVVSEAMGALRLKLGHER
GFAEGDWKPLWVVDFPMFEWDDKDGRWFAMHHPFTAPKCGVEELKADPGKALSKGYDMVL
NGTEIGGGSVRIHRQDMQDVVFKLLGIEDEEAQQKFGFLLTALKYGAPPHGGIAFGLDRL
VMLMSGANSIREVMAFPKTQSAWCPMIDAPAPVTDMQLRELGIKLRKPPEAKAVEAN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagccaccgatgtggagaactgaccgaaagccacctggatcaagaagttgatctc
tgtggctggacccaccgccgccgcgaccacggcggcgtcattttcatcgacctccgcgac
cgggaaggcttggtccaggtcgtgttcgatcccgattacgccgacgccttcaagctggcg
gaaagcgtccgcagcgagtacgtgctgaaggtccatggcaaggtgcgccgccgcccgcaa
ggcaccgaaaaccccaacctgggcaccggcaaggtcgaagtgctggcgacggaactggaa
atcctcaacaaggccgaaaccccgcccttcccgctggaaagcgaggtcgaggtcagcgag
gaaacccggctgcgctaccgctacatcgacctgcgccgccccgccatgcagcaaaagctc
aggatgcggcgggacatcacccgctccctgcgcggcttcatggacgccaacggcttttgg
gaaatcgagacgccgttcttgaccaaggccaccccggaaggcgcccgcgactatctggtc
ccgagccgcacccaccagaaccatttcttcgccctgccgcaatcgccccagctctacaag
caattgctgatggtgtccggcctggaccgctattaccaagtggtgcgctgcttccgcgac
gaagacctccgcgccgaccgccagccggaattcacccagctcgatatcgaaacctcgttc
atggaccaggacgccatcaccgacctgatggaggagatgatccgcgccctgttcaaagag
gtgctggacgtggaactgcccaacccgttcccgcgcatgacctatgcagaagccatgcgc
gactacggttcggacaagccggatttgcgcgtgcccttcaaactggtggacgtggccgat
ttgctgaccacctgcgaattcaaggtattcgcgggcgcggccaaagacccggaaggccgg
gtcgcggccctgcgcctgcccaagggcgcggaactgtcccgcaaggaactggatgatctg
gcggctttcgtcgccatctacggcgcgaaaggtttggcctatatcaaagtcaccgaccgc
gccgccgggatcgagggtttgcaatcgcccatcgtgaaattcctgccgccggaggccgtg
ctggcgatcctggaccgggtcggcgcggaaaccggcgacgtggtgtttttcggggccgac
aaggccaaggtcgtaagcgaggccatgggcgcgttgcggctcaagctaggccatgagcgc
ggcttcgcggaaggcgactggaaacccttgtgggtggtggatttccccatgttcgagtgg
gacgacaaggacgggcgctggttcgccatgcaccatcccttcaccgcgcccaagtgcggc
gtggaggaactcaaagccgatccgggcaaggcgctgtcgaagggctacgacatggtgttg
aacggcaccgagatcggcggcggttcggtgcgtatccatcgccaggacatgcaggacgtg
gtgttcaagctgctcggcatcgaggacgaggaagcgcagcaaaaattcggcttcctactg
accgcgctgaaatacggcgcgccgccgcatggtggcatcgccttcggcctggaccgccta
gtgatgctgatgagcggggccaactcgatccgcgaagtgatggccttccccaagacccaa
tcggcctggtgtccgatgatcgacgcgcccgcgccggtgacggatatgcagttgcgggag
ttggggattaagctgaggaagccgccggaggccaaggcggtggaagccaactaa
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