Methylomagnum ishizawai: MishRS11D_33980
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Entry
MishRS11D_33980 CDS
T07434
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
misz03016
]
MishRS11D_33980 (truB)
Enzymes [BR:
misz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MishRS11D_33980 (truB)
Transfer RNA biogenesis [BR:
misz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MishRS11D_33980 (truB)
Prokaryotic type
MishRS11D_33980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BBL76300
LinkDB
All DBs
Position
complement(3782039..3782974)
Genome browser
AA seq
311 aa
AA seq
DB search
MSRKANALDLNGIFLLDKSPGITSNGALQRAKWLFRAKKAGHTGSLDPIASGLLPLCLGE
GTKLSGFLLNTDKRYQVRVRLGVATETGDTEGAVIETKPVPPLSAEFIEGYLAPFRGDIL
QVPPMYSALKHQGQRLYDLARKGIEVEREARAVTIYELRLEDFDATSVDLDVHCSKGTYI
RTLAEDLGRAMGCGGHVEILRRTAVGDLKVADAHTLDRLEALAEAERPGLLLPLDTIVSD
LPAVQLNDQLSFYLRKGEAVLVPKAPTEGWVRLYGRHSLFMGVGEVLDDGRIAPRRLVKL
KREQPDGAAVP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcaaggccaacgccctcgatctgaacggtatctttctgctggataaatcccca
gggatcacctccaacggtgccttgcaaagggccaaatggctattccgggccaagaaggcc
ggccataccggcagcctcgaccccatcgccagcggtttgttgccgctgtgcttgggcgag
ggcaccaagctgtccggtttcctgctcaacaccgacaagcgctaccaagtgcgggtgcgc
ttaggcgtcgcgaccgaaaccggcgacaccgagggcgcggtgatcgaaaccaagcccgtg
ccgcccttgagcgccgaattcatcgagggctatctggctccgttccggggcgatatcctc
caggtgccgccgatgtattccgccctcaagcaccaaggccagcgcttgtacgatctggcc
cgcaagggcatcgaggtcgagcgcgaggcccgtgccgtcaccatctacgaactccgcctc
gaagacttcgacgcgaccagcgtggatttggacgtgcattgctccaagggcacctatatc
cgcaccctggccgaggatttgggccgggccatgggttgtggtgggcatgtcgaaatcctg
cgccgtaccgccgtcggcgatcttaaagtggccgatgcccacaccctggatcggttggaa
gccctggccgaagccgagcgcccgggcttgctcttgcccttggataccatcgtgtccgat
ttgcccgctgtgcagctcaacgatcagctgagcttctatctccgcaagggcgaagcggtg
ctggtgccgaaagcgcccaccgaaggctgggtccggctctatggccgccattccctgttc
atgggcgtgggcgaggtgctggacgatggccggatcgcgccccggcgcttggtcaaactc
aagcgcgagcaaccggacggggccgcggttccctga
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integrated database retrieval system
