Methylomagnum ishizawai: MishRS11D_34060
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Entry
MishRS11D_34060 CDS
T07434
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
misz
Methylomagnum ishizawai
Pathway
misz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MishRS11D_34060 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
misz03400
]
MishRS11D_34060 (xseA)
Enzymes [BR:
misz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
MishRS11D_34060 (xseA)
DNA repair and recombination proteins [BR:
misz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
MishRS11D_34060 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CofH_C
Motif
Other DBs
NCBI-ProteinID:
BBL76308
LinkDB
All DBs
Position
3791669..3793030
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AA seq
453 aa
AA seq
DB search
MDLSAPGGDARAVYTVSRLNRETRFLLQECFGSLWIEGEISNLSAPASGHLYFTLKDAEA
QVRCALFRPQARSLRYKPRNGAQVLVKAQVGLYEPRGDFQLVVETIEAAGDGALLRAFEA
LKHQLAAEGLFDAVHKKPIPALPRCIGVVTSPTGAALRDVLTVLKRRFPAIPVIVFPAQV
QGAEAQHAIAAALARADRLKLCDVLILARGGGALEDLWAFNEETVARAIHACATPVIAGI
GHETDFTIADFVADHRAPTPSAAAAAASPDRADWLERFQRLEARLRRGYGIVLERRERTR
AFLAARLARVHPEQRLRTQSQRLDALAARLQRALSQRLAQARHRLDHQTARLLRHDPTPR
LERFARGYPGLEARLAAALGRLLESRRRQCAAATLRLEALNPLATLARGYAIAYRPATGH
ILRSAAEARPGDTLELRLGQGVLAVRVEALREA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
gtggacctatccgcgcccggcggcgacgcccgcgccgtctacaccgtgtcccgcctcaac
cgggaaacccgcttcctgctgcaagaatgcttcggcagcctgtggatcgagggcgaaatc
tccaatctttccgccccagcgtccggccatctttatttcaccctcaaggacgccgaagcc
caggtgcgctgcgccctattccgcccgcaggcccgttcgctgcgttacaaaccccggaac
ggggcgcaagtcctggtcaaggcgcaggtgggattgtacgaaccgcgcggggatttccaa
ctggtggtcgagactatcgaggcggcgggcgatggcgctttgctgcgggcgttcgaggcg
ctcaagcaccagctggcggcggaaggcttgttcgacgccgtgcataaaaaaccgatcccc
gccttgccccgctgcatcggcgtggtgacttccccgaccggcgcggcgctgcgcgatgtg
ctgacggtgctgaaacgccgcttccccgccattcccgtgatcgtgttccccgcccaggtc
caaggtgccgaggcccagcacgccatcgccgccgccctggcgcgggccgaccgcctcaaa
ctgtgcgatgtgctgatcctggcgcggggcggcggtgccctggaggatttgtgggccttc
aacgaagaaaccgtggcgcgggccatccacgcctgcgcgacccccgtcatcgccggcatc
ggccacgagaccgatttcaccatcgccgatttcgtggccgaccacagggcgccgaccccc
tcggcggcggcggcggcggccagccccgaccgcgccgattggctggagcggttccagcgc
ctggaagcgcggttgcggcggggctacgggatcgttctggaacggcgggaacggacgcgg
gctttcttggccgcacggctggcgcgggtccatcccgaacagcgcctacgcacccaaagc
cagcggctggacgcactcgcggcccggttgcaacgcgccctctcccaacgcttggcacag
gcccggcaccgcctggaccaccaaaccgcccggttgctccggcacgaccccacgccccgc
ttggagcgcttcgcccgtggatacccaggactggaagcccgcctcgccgccgccctgggc
cgcctcctggaaagccggcggcggcaatgcgccgccgccaccctgcggctcgaagcgctc
aacccgctcgccaccctggcgcggggctatgccatcgcctaccggcccgcgaccgggcat
atcctgcgctcggcggcggaagcccggcccggcgacacgctggaactgcgcctagggcaa
ggcgtgctggcggtccgggtcgaagccctccgcgaggcttga
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