Methylomagnum ishizawai: MishRS11D_40330
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Entry
MishRS11D_40330 CDS
T07434
Name
(GenBank) transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
misz
Methylomagnum ishizawai
Brite
KEGG Orthology (KO) [BR:
misz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
misz03000
]
MishRS11D_40330
Transcription factors [BR:
misz03000
]
Prokaryotic type
Helix-turn-helix
LysR family
MishRS11D_40330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_11
PBP_like
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BBL76935
LinkDB
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Position
complement(4500105..4501061)
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AA seq
318 aa
AA seq
DB search
MNITLRQLKVFERVARRLSFTRAAEELYLTQPAVSMQIKQFEENIGLPLFERLGKKIYLT
RAGEELYQLSRTISEQLDAAELLIEELKGTDGGRLVVAVASTVHYFGIRLLAEFCRRYPK
VKVSFKVTNRKGLLQQLEDNEADVVLMGQPPEDQDLQYEAFLENPLVLIAPAGHPLAGKR
GIPLSELQDENFIMREQGSGTRSAAERYFGERGVHLTASMEMNTNGAIKQGVEEGLGLAI
VSIHTLERELESGRVVVLDVEHFPIRRQWFIVHRSGKRLSAVAREFADFVRSEARSFVRT
EIIEAALGKASAAPGPEA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccctccggcagttgaaggttttcgagcgggtcgcccgccgcctgagtttc
acccgcgcggcggaggagctttacctgacccagcccgccgtttccatgcagatcaagcag
ttcgaggagaatatcggcctgcctttgttcgagcgcctgggcaagaaaatctacctgacc
cgtgccggcgaggagttgtaccagctcagccgcaccatctccgaacaattggacgccgcc
gagttgctaatcgaggaattgaagggcaccgacggcgggcgtttggtggtcgcggtcgcc
agcacggtgcattatttcggcatccgcttgctggccgaattctgccgccgctatcccaag
gtcaaggtcagtttcaaggtcaccaaccgcaagggcttgttgcagcagttggaggacaac
gaggccgatgtggtgctgatgggccagccgccggaggaccaggatttgcaatacgaggcc
ttcctggaaaaccccttggtgttgatcgccccggccggccatcccctggcgggcaagcgg
gggattccgttgagcgagcttcaggacgagaacttcatcatgcgggagcagggttcgggc
acccgcagcgcggcggagcgctatttcggcgaacgcggggtgcatctcaccgccagcatg
gaaatgaacaccaacggggccatcaagcagggcgtggaggaaggcttggggctggccatc
gtgtccatccataccttggagcgcgagttggaaagcggccgggtggtggtgctggacgtg
gagcatttcccgatccggcggcaatggttcatcgtccatcgttcgggcaagcgcttgtcg
gcggtggcgcgggaattcgccgatttcgtgcggagcgaggcccgctcgttcgtgcgtacc
gagattatcgaggcggcgctgggcaaggcgtccgccgcgccgggaccggaagcctaa
DBGET
integrated database retrieval system
